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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • peroxisome 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014448.1-P Field mustard cytosol 99.64 92.59
CDY56927 Canola endoplasmic reticulum, golgi 96.38 86.93
CDY48937 Canola cytosol 82.25 76.69
CDX71758 Canola cytosol 81.88 76.35
AT2G24190.2 Thale cress cytosol 77.17 70.76
AT3G61220.3 Thale cress endoplasmic reticulum, vacuole 77.17 65.14
PGSC0003DMT400000078 Potato cytosol 57.61 53.0
Solyc01g094220.2.1 Tomato cytosol 57.25 52.67
KRH40500 Soybean cytosol, nucleus 53.99 50.68
KRH65114 Soybean cytosol 52.17 48.98
CDY15148 Canola cytosol 52.17 48.81
CDX90062 Canola cytosol 52.17 48.81
Os04t0531700-01 Rice mitochondrion 19.2 48.62
PGSC0003DMT400000067 Potato golgi, peroxisome 51.09 48.45
Solyc01g094210.2.1 Tomato cytosol 51.45 47.81
Solyc01g094250.2.1 Tomato cytosol 54.71 47.34
Solyc01g094260.2.1 Tomato cytosol 54.71 47.34
PGSC0003DMT400000080 Potato cytosol, mitochondrion, plastid 51.45 46.41
Solyc01g094240.2.1 Tomato cytosol 53.26 46.23
Solyc01g099560.2.1 Tomato cytosol 29.35 45.76
HORVU5Hr1G031560.1 Barley cytosol 21.01 45.67
Solyc01g094270.2.1 Tomato cytosol, plastid 51.81 45.4
KXG31187 Sorghum mitochondrion 48.19 44.78
TraesCS7A01G111500.1 Wheat cytosol 35.51 44.14
PGSC0003DMT400026580 Potato cytosol 49.28 43.87
TraesCS2B01G388200.2 Wheat cytosol 42.75 43.7
TraesCS2D01G367800.1 Wheat cytosol, plastid 48.19 43.46
TraesCS2A01G370900.1 Wheat cytosol 48.55 43.37
TraesCS2D01G367200.1 Wheat cytosol 48.55 43.37
EES11167 Sorghum cytosol 48.19 42.9
Solyc10g017570.2.1 Tomato cytosol 48.19 42.9
TraesCS2B01G388700.1 Wheat cytosol, plastid 47.46 42.81
EES11175 Sorghum cytosol, plastid 46.38 42.81
EES11171 Sorghum cytosol 47.83 42.44
TraesCS2B01G388100.1 Wheat cytosol 48.19 42.22
Os04t0531900-01 Rice cytosol, plastid 46.74 42.02
TraesCS2A01G516200.2 Wheat mitochondrion 46.01 41.78
Os04t0532400-01 Rice cytosol 46.38 41.69
TraesCS7A01G114100.1 Wheat cytosol 46.38 41.69
HORVU7Hr1G024270.5 Barley cytosol 46.38 41.69
TraesCS2D01G517700.1 Wheat cytosol 46.38 41.56
EES11173 Sorghum cytosol 46.74 41.48
Os04t0532100-01 Rice cytosol 46.38 41.42
TraesCS2D01G367700.1 Wheat mitochondrion 46.38 41.42
TraesCS2A01G371300.1 Wheat cytosol 44.93 41.33
TraesCS2A01G371100.1 Wheat cytosol 45.65 41.31
TraesCS2B01G388600.1 Wheat cytosol, plastid 45.65 41.18
TraesCS2A01G371400.1 Wheat cytosol, plastid 45.65 41.18
KXG26779 Sorghum cytosol 46.38 41.16
HORVU2Hr1G091460.1 Barley cytosol, mitochondrion, plastid 46.74 41.08
EER93229 Sorghum cytosol 46.74 41.08
EES11174 Sorghum cytosol 46.01 40.97
TraesCS2B01G544800.1 Wheat cytosol 45.65 40.91
HORVU2Hr1G091430.7 Barley cytosol 46.38 40.89
HORVU1Hr1G064390.1 Barley cytosol 45.65 40.65
TraesCS2A01G371200.1 Wheat cytosol 44.57 40.33
TraesCS2B01G388300.1 Wheat cytosol 45.29 40.06
TraesCS2A01G371000.1 Wheat cytosol 44.57 39.94
TraesCS2D01G367600.2 Wheat plastid 45.29 39.81
EES07554 Sorghum cytosol 44.2 39.61
TraesCS2A01G371500.1 Wheat plastid 47.83 39.4
EES07551 Sorghum cytosol 43.12 39.27
TraesCS1B01G437500.1 Wheat cytosol 44.2 39.1
PGSC0003DMT400088659 Potato cytosol 16.67 38.98
EES07552 Sorghum cytosol 43.48 38.96
EES09734 Sorghum cytosol 43.84 38.91
TraesCS2A01G099800.1 Wheat cytosol 44.2 38.85
EES07553 Sorghum cytosol 43.48 38.84
TraesCS2D01G099300.1 Wheat cytosol 43.84 38.53
TraesCS1D01G415900.1 Wheat cytosol 43.48 38.46
TraesCS2B01G116700.1 Wheat mitochondrion 43.48 38.22
KXG31133 Sorghum cytosol 39.86 37.93
HORVU1Hr1G089830.1 Barley cytosol 42.75 37.82
EER97757 Sorghum cytosol 44.93 37.46
GSMUA_Achr5P12200_001 Banana cytosol 42.03 36.83
OQU82017 Sorghum extracellular 21.74 36.36
TraesCS2D01G367400.1 Wheat plastid 45.29 35.92
HORVU2Hr1G091440.3 Barley mitochondrion 45.65 35.39
HORVU2Hr1G114340.4 Barley endoplasmic reticulum, golgi 46.74 35.34
TraesCS1A01G408800.1 Wheat cytosol 42.39 34.51
CDY53157 Canola cytosol 39.49 34.49
CDX84895 Canola cytosol 38.04 33.87
CDY00233 Canola cytosol 38.77 33.86
CDY45793 Canola cytosol 37.68 33.55
EES17690 Sorghum cytosol 20.29 33.53
TraesCS2D01G099500.1 Wheat plastid 45.65 33.51
KXG36979 Sorghum plastid 45.29 33.42
Os07t0685800-01 Rice plastid 44.93 33.24
HORVU2Hr1G017120.1 Barley plastid 44.2 33.24
CDX71880 Canola peroxisome 35.14 33.22
TraesCS2A01G100000.2 Wheat plastid 44.93 32.98
TraesCS2B01G117000.1 Wheat plastid 44.93 32.89
CDX67809 Canola peroxisome 35.14 32.88
CDY05983 Canola cytosol, peroxisome, plastid 34.78 32.88
OQU85768 Sorghum cytosol 42.39 32.59
HORVU5Hr1G031520.2 Barley cytosol 32.97 32.5
TraesCS2B01G388500.1 Wheat cytosol, mitochondrion, nucleus 17.75 30.82
Os02t0640600-00 Rice mitochondrion 37.32 27.69
GSMUA_Achr5P12210_001 Banana mitochondrion 43.84 19.71
Os04t0531750-00 Rice mitochondrion 2.17 1.81
Protein Annotations
EnsemblPlants:CDX89104EnsemblPlantsGene:GSBRNA2T00149240001Gene3D:3.40.50.720GO:A0A078DKE7GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famInterPro:Sc_DH/Rdtase_CS
PANTHER:PTHR43490PANTHER:PTHR43490:SF58PFAM:PF00106PRINTS:PR00080PRINTS:PR00081ProteinID:CDX89104
ProteinID:CDX89104.1ScanProsite:PS00061SUPFAM:SSF51735UniParc:UPI0004EE5AAAMapMan:50.1.1:
Description
BnaA04g00820D
Coordinates
chrLK031857:+:1079502..1081328
Molecular Weight (calculated)
31022.2 Da
IEP (calculated)
4.985
GRAVY (calculated)
-0.245
Length
276 amino acids
Sequence
(BLAST)
001: MTEETPRYAV VTGANKGIGF EICRQLANNG IRVVLTSRDE KRGLEAVETL RRETEVSEQT LVFHQLDVTD PASITSLAQF VKAQFGKLDI LINNAGVSGV
101: IIDIDAMRAG KEKVDFNWEE NIPENDYDLA KECLNINYYG PKRMCEALIP LLELSDSPRI INVSSFMGQL KNLLNEWAKG ILSDAENLTE ERIDEVIDKL
201: LNEFKDGVIK TKDWSKVMAA YVVSKASLNG YTRILAKKHP EIRVNSVSSC PVRLALLPYQ ETPSGCFFNR KQLSEF
Best Arabidopsis Sequence Match ( AT3G61220.1 )
(BLAST)
001: MAEETPRYAV VTGANRGIGF EICRQLASEG IRVVLTSRDE NRGLEAVETL KKELEISDQS LLFHQLDVAD PASITSLAEF VKTQFGKLDI LVNNAGIGGI
101: ITDAEALRAG AGKEGFKWDE IITETYELTE ECIKINYYGP KRMCEAFIPL LKLSDSPRIV NVSSSMGQLK NVLNEWAKGI LSDAENLTEE RIDQVINQLL
201: NDFKEGTVKE KNWAKFMSAY VVSKASLNGY TRVLAKKHPE FRVNAVCPGF VKTDMNFKTG VLSVEEGASS PVRLALLPHQ ETPSGCFFSR KQVSEF
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNT2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.