CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025924_P001	Maize	mitochondrion	87.29	76.32
EES11174	Sorghum	cytosol	74.25	71.61
EES11171	Sorghum	cytosol	70.9	68.17
Os04t0532100-01	Rice	cytosol	68.9	66.67
EES11173	Sorghum	cytosol	67.89	65.27
EES09734	Sorghum	cytosol	67.22	64.63
EES11167	Sorghum	cytosol	65.55	63.23
OQU82017	Sorghum	extracellular	34.11	61.82
EER93229	Sorghum	cytosol	60.87	57.96
KRH40499	Soybean	cytosol	21.07	57.27
Bra032567.1-P	Field mustard	cytosol	21.4	54.7
EES17690	Sorghum	cytosol	30.43	54.49
EES07551	Sorghum	cytosol	54.52	53.8
EES07552	Sorghum	cytosol	55.18	53.57
KRH48198	Soybean	cytosol	51.51	53.29
EES07553	Sorghum	cytosol	54.52	52.75
KRH00696	Soybean	mitochondrion	51.84	52.72
KRH00691	Soybean	cytosol	44.82	52.55
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	52.17	52.53
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	52.17	52.53
KRH48196	Soybean	cytosol	51.51	52.03
EES07554	Sorghum	cytosol	53.51	51.95
KXG31133	Sorghum	cytosol	50.17	51.72
VIT_15s0046g03600.t01	Wine grape	cytosol	51.51	51.68
VIT_15s0046g03650.t01	Wine grape	cytosol	51.17	51.34
VIT_15s0046g03550.t01	Wine grape	cytosol	50.84	51.01
PGSC0003DMT400000067	Potato	golgi, peroxisome	49.5	50.86
Bra032573.1-P	Field mustard	cytosol	22.74	50.75
KXG31187	Sorghum	mitochondrion	50.17	50.51
KXG26779	Sorghum	cytosol	52.51	50.48
KRH65113	Soybean	cytosol	50.17	50.17
KRH17659	Soybean	cytosol	16.39	50.0
VIT_15s0046g03570.t01	Wine grape	plastid	49.5	49.83
KRH40500	Soybean	cytosol, nucleus	48.83	49.66
KRH48194	Soybean	cytosol	49.16	49.33
Solyc01g094210.2.1	Tomato	cytosol	48.83	49.16
KRH48202	Soybean	cytosol	48.83	48.83
KRH48206	Soybean	cytosol	49.5	48.52
PGSC0003DMT400047834	Potato	cytosol	48.49	48.49
VIT_06s0061g00670.t01	Wine grape	plastid	49.16	48.36
Solyc11g071460.1.1	Tomato	cytosol	48.16	48.16
PGSC0003DMT400048181	Potato	cytosol	47.83	47.83
PGSC0003DMT400048179	Potato	cytosol	47.83	47.83
AT1G01800.1	Thale cress	cytosol	47.16	47.8
PGSC0003DMT400088659	Potato	cytosol	18.73	47.46
VIT_06s0061g00640.t01	Wine grape	cytosol	48.16	47.37
CDX71758	Canola	cytosol	46.82	47.3
KRH65114	Soybean	cytosol	46.49	47.28
KRH65115	Soybean	cytosol	51.17	47.08
Solyc01g099560.2.1	Tomato	cytosol	27.76	46.89
Bra014448.1-P	Field mustard	cytosol	46.49	46.8
Solyc01g094220.2.1	Tomato	cytosol	46.82	46.67
Bra007585.1-P	Field mustard	cytosol	46.15	46.62
CDY48937	Canola	cytosol	46.15	46.62
CDX89104	Canola	cytosol	42.81	46.38
PGSC0003DMT400000078	Potato	cytosol	46.49	46.33
Bra033230.1-P	Field mustard	cytosol	45.48	46.1
CDY15148	Canola	cytosol	45.48	46.1
CDX90062	Canola	cytosol	45.15	45.76
CDY56927	Canola	endoplasmic reticulum, golgi	46.49	45.42
VIT_02s0025g04510.t01	Wine grape	cytosol	30.1	45.23
OQU85768	Sorghum	cytosol	54.18	45.13
AT2G24190.2	Thale cress	cytosol	44.48	44.19
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	18.73	44.09
Solyc01g094270.2.1	Tomato	cytosol, plastid	46.15	43.81
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	47.83	43.73
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	44.48	43.46
Solyc01g094240.2.1	Tomato	cytosol	46.15	43.4
Solyc01g094260.2.1	Tomato	cytosol	46.15	43.26
Solyc01g094250.2.1	Tomato	cytosol	45.48	42.63
EER97757	Sorghum	cytosol	46.82	42.3
Solyc10g017570.2.1	Tomato	cytosol	42.14	40.65
PGSC0003DMT400026580	Potato	cytosol	42.14	40.65
Solyc11g042710.1.1	Tomato	cytosol	21.07	39.87
OQU81866	Sorghum	cytosol, peroxisome, plastid	37.79	38.97
VIT_06s0009g01450.t01	Wine grape	plastid	32.78	38.89
KRH40504	Soybean	endoplasmic reticulum	50.17	38.46
KXG36979	Sorghum	plastid	45.82	36.63
EES07125	Sorghum	cytosol, peroxisome, plastid	36.45	35.16
EES04148	Sorghum	cytosol	33.44	30.86
VIT_15s0046g03530.t01	Wine grape	cytosol	25.75	22.51
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	49.16	19.78

Protein Annotations

EnsemblPlants:EES11175	EnsemblPlantsGene:SORBI_3006G158800	EntrezGene:8083006	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
ncoils:Coil	PANTHER:PTHR43490	PANTHER:PTHR43490:SF19	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081
ProteinID:EES11175	ProteinID:EES11175.1	RefSeq:XP_002446847.1	SUPFAM:SSF51735	UniParc:UPI0001A86EF1	UniProt:C5YCW7
MapMan:50.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:51710865..51712936

Molecular Weight (calculated)

32109.5 Da

IEP (calculated)

5.231

GRAVY (calculated)

-0.035

Length

299 amino acids

Sequence
(BLAST)

001: MAAAIGTRVA VVTGGNKGIG LEVCRQLASN GITVVLTARD EKRGAAAVEE LKDAGLSDVI FHQLEVTDAQ SIARLAGFLK ARFGKLDILV NNAAIGGVET
101: LPIENPAEIK GLDAFQMMQW MGKQCRPTSD AAKAGIQTNY YGVKNVTEAL LPLLQASSDG RVVNVSSDFG LLSHIRNEEV KQELDDIENL TEERLDELLS
201: AFLRDFEAGA LDARGWPTEF SAYKVAKVAL NSYSRVLARR HPELRINCAH PGYVKTDMTR QTGLLTPAEG AANIVKVALL PEGGQTGAFF ALGQEAPFV

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.