CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025923_P001	Maize	cytosol	83.23	82.96
EES11171	Sorghum	cytosol	74.84	74.6
EES11175	Sorghum	cytosol, plastid	71.61	74.25
EES11173	Sorghum	cytosol	71.94	71.7
Os04t0532100-01	Rice	cytosol	69.35	69.58
EES11167	Sorghum	cytosol	69.03	69.03
EES09734	Sorghum	cytosol	68.06	67.85
EER93229	Sorghum	cytosol	65.16	64.33
OQU82017	Sorghum	extracellular	33.87	63.64
EES17690	Sorghum	cytosol	31.94	59.28
EES07551	Sorghum	cytosol	55.48	56.77
EES07554	Sorghum	cytosol	54.19	54.55
EES07552	Sorghum	cytosol	53.87	54.22
KRH40499	Soybean	cytosol	19.03	53.64
EES07553	Sorghum	cytosol	53.23	53.4
KXG31133	Sorghum	cytosol	49.35	52.76
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	50.0	52.19
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	50.0	52.19
VIT_15s0046g03550.t01	Wine grape	cytosol	50.0	52.01
VIT_15s0046g03600.t01	Wine grape	cytosol	49.35	51.34
KRH48198	Soybean	cytosol	47.74	51.21
KRH00696	Soybean	mitochondrion	48.39	51.02
PGSC0003DMT400088659	Potato	cytosol	19.35	50.85
VIT_15s0046g03570.t01	Wine grape	plastid	48.71	50.84
VIT_15s0046g03650.t01	Wine grape	cytosol	48.71	50.67
PGSC0003DMT400000067	Potato	golgi, peroxisome	47.42	50.52
KRH65113	Soybean	cytosol	48.71	50.5
Bra032567.1-P	Field mustard	cytosol	19.03	50.43
KXG26779	Sorghum	cytosol	50.32	50.16
KRH48196	Soybean	cytosol	47.74	50.0
KRH40500	Soybean	cytosol, nucleus	47.42	50.0
VIT_06s0061g00670.t01	Wine grape	plastid	49.03	50.0
Solyc11g071460.1.1	Tomato	cytosol	48.06	49.83
PGSC0003DMT400048181	Potato	cytosol	47.74	49.5
KRH48202	Soybean	cytosol	47.74	49.5
KRH48194	Soybean	cytosol	47.42	49.33
KRH48206	Soybean	cytosol	48.39	49.18
PGSC0003DMT400048179	Potato	cytosol	47.42	49.16
KRH00691	Soybean	cytosol	40.32	49.02
VIT_06s0061g00640.t01	Wine grape	cytosol	47.74	48.68
PGSC0003DMT400047834	Potato	cytosol	46.45	48.16
Solyc01g094210.2.1	Tomato	cytosol	46.13	48.15
Solyc01g099560.2.1	Tomato	cytosol	27.42	48.02
Bra032573.1-P	Field mustard	cytosol	20.65	47.76
CDX71758	Canola	cytosol	45.48	47.64
CDY48937	Canola	cytosol	44.84	46.96
Bra007585.1-P	Field mustard	cytosol	44.84	46.96
KRH65114	Soybean	cytosol	44.52	46.94
Bra014448.1-P	Field mustard	cytosol	44.84	46.8
VIT_02s0025g04510.t01	Wine grape	cytosol	30.0	46.73
KXG31187	Sorghum	mitochondrion	44.52	46.46
Solyc01g094220.2.1	Tomato	cytosol	44.84	46.33
OQU85768	Sorghum	cytosol	53.55	46.24
AT1G01800.1	Thale cress	cytosol	43.87	46.1
CDX89104	Canola	cytosol	40.97	46.01
PGSC0003DMT400000078	Potato	cytosol	44.52	46.0
CDY56927	Canola	endoplasmic reticulum, golgi	44.84	45.42
EER97757	Sorghum	cytosol	48.06	45.02
KRH65115	Soybean	cytosol	47.1	44.92
AT2G24190.2	Thale cress	cytosol	43.55	44.85
Solyc01g094270.2.1	Tomato	cytosol, plastid	44.84	44.13
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	43.55	44.12
Bra033230.1-P	Field mustard	cytosol	41.94	44.07
KRH17659	Soybean	cytosol	13.87	43.88
CDY15148	Canola	cytosol	41.61	43.73
Solyc01g094240.2.1	Tomato	cytosol	44.84	43.71
CDX90062	Canola	cytosol	41.29	43.39
Solyc01g094260.2.1	Tomato	cytosol	44.52	43.26
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	45.48	43.12
Solyc01g094250.2.1	Tomato	cytosol	43.87	42.63
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	17.42	42.52
PGSC0003DMT400026580	Potato	cytosol	42.26	42.26
Solyc10g017570.2.1	Tomato	cytosol	41.29	41.29
VIT_06s0009g01450.t01	Wine grape	plastid	33.23	40.87
OQU81866	Sorghum	cytosol, peroxisome, plastid	35.81	38.28
KXG36979	Sorghum	plastid	46.13	38.24
Solyc11g042710.1.1	Tomato	cytosol	19.03	37.34
KRH40504	Soybean	endoplasmic reticulum	45.81	36.41
EES07125	Sorghum	cytosol, peroxisome, plastid	35.16	35.16
EES04148	Sorghum	cytosol	33.55	32.1
VIT_15s0046g03530.t01	Wine grape	cytosol	24.52	22.22
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	48.71	20.32

Protein Annotations

EnsemblPlants:EES11174	EnsemblPlantsGene:SORBI_3006G158700	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	ncoils:Coil
PANTHER:PTHR43490	PANTHER:PTHR43490:SF19	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:EES11174
ProteinID:EES11174.1	RefSeq:XP_002446846.1	SUPFAM:SSF51735	unigene:Sbi.11850	UniParc:UPI0001A86EF0	UniProt:C5YCW6
MapMan:50.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:51708780..51710864

Molecular Weight (calculated)

33649.2 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.114

Length

310 amino acids

Sequence
(BLAST)

001: MEAAIPNPSA LKTRIAVVTG GNKGIGLEVC RQLAGDGATV VLTARDETRG AAAAEKLREA GLSNVIFHQL EITDAPSIAR LAEFLKTRFG KLDILINNAA
101: IGAVEYVQDP ADSPASEEKF SGMDQGQRLE CMFKGVRETY DAAREGVKTN YYGVKHVIEA LLPLLQASSD GRIVNVSSEF GLLRLINNEE LRQELNDVEK
201: LTEERLDEVL ATFLRDFEAG EVEARGWPMA FSAYKVAKVA MNAYSRILAR RHPELRINCA HPGYVSTDMT IHTGPLTPEE GAANLVKVAL LPEGGPTGAY
301: FAWGVEASFV

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.