Factsheet for VIT_06s0061g00620.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 3
mitochondrion 4
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0061g00670.t01	Wine grape	plastid	36.2	88.49
VIT_06s0061g00640.t01	Wine grape	cytosol	33.78	82.57
VIT_15s0046g03570.t01	Wine grape	plastid	22.88	57.24
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	22.88	57.24
VIT_15s0046g03600.t01	Wine grape	cytosol	22.88	57.05
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	22.75	56.9
VIT_15s0046g03550.t01	Wine grape	cytosol	22.61	56.38
VIT_15s0046g03650.t01	Wine grape	cytosol	22.21	55.37
VIT_02s0025g04510.t01	Wine grape	cytosol	14.13	52.76
TraesCS2A01G516200.2	Wheat	mitochondrion	21.0	51.32
TraesCS2D01G517700.1	Wheat	cytosol	21.13	50.97
Os04t0532100-01	Rice	cytosol	21.13	50.81
KXG26779	Sorghum	cytosol	21.27	50.8
EES07551	Sorghum	cytosol	20.59	50.49
Os04t0531700-01	Rice	mitochondrion	7.4	50.46
HORVU5Hr1G031560.1	Barley	cytosol	8.61	50.39
TraesCS2B01G544800.1	Wheat	cytosol	20.86	50.32
Os04t0531900-01	Rice	cytosol, plastid	20.59	49.84
TraesCS2A01G371100.1	Wheat	cytosol	20.46	49.84
KXG31187	Sorghum	mitochondrion	19.92	49.83
OQU82017	Sorghum	extracellular	11.04	49.7
EES07552	Sorghum	cytosol	20.59	49.68
Os04t0532400-01	Rice	cytosol	20.46	49.51
TraesCS2A01G371000.1	Wheat	cytosol	20.46	49.35
KXG31133	Sorghum	cytosol	19.25	49.31
EES11175	Sorghum	cytosol, plastid	19.78	49.16
TraesCS2A01G371400.1	Wheat	cytosol, plastid	20.19	49.02
EES11171	Sorghum	cytosol	20.46	48.87
TraesCS2A01G370900.1	Wheat	cytosol	20.32	48.87
TraesCS2D01G367200.1	Wheat	cytosol	20.32	48.87
EES07553	Sorghum	cytosol	20.32	48.87
TraesCS2B01G388300.1	Wheat	cytosol	20.46	48.72
EES11174	Sorghum	cytosol	20.32	48.71
TraesCS2B01G388600.1	Wheat	cytosol, plastid	20.05	48.69
TraesCS2D01G367700.1	Wheat	mitochondrion	20.19	48.54
EER93229	Sorghum	cytosol	20.46	48.41
TraesCS2B01G388700.1	Wheat	cytosol, plastid	19.78	48.04
EES11173	Sorghum	cytosol	20.05	47.91
HORVU7Hr1G024270.5	Barley	cytosol	19.78	47.88
TraesCS2A01G371200.1	Wheat	cytosol	19.65	47.87
TraesCS2B01G388200.2	Wheat	cytosol	17.36	47.78
TraesCS2B01G116700.1	Wheat	mitochondrion	20.19	47.77
TraesCS7A01G114100.1	Wheat	cytosol	19.65	47.56
TraesCS2A01G099800.1	Wheat	cytosol	20.05	47.45
EES11167	Sorghum	cytosol	19.78	47.42
HORVU1Hr1G064390.1	Barley	cytosol	19.78	47.42
TraesCS2D01G367800.1	Wheat	cytosol, plastid	19.52	47.39
TraesCS2D01G099300.1	Wheat	cytosol	19.92	47.13
TraesCS2B01G388100.1	Wheat	cytosol	19.78	46.67
TraesCS2D01G367600.2	Wheat	plastid	19.65	46.5
HORVU2Hr1G091460.1	Barley	cytosol, mitochondrion, plastid	19.38	45.86
TraesCS1D01G415900.1	Wheat	cytosol	19.11	45.51
EES07554	Sorghum	cytosol	18.84	45.45
HORVU2Hr1G091430.7	Barley	cytosol	18.98	45.05
TraesCS7A01G111500.1	Wheat	cytosol	13.46	45.05
HORVU2Hr1G091440.3	Barley	mitochondrion	21.53	44.94
EER97757	Sorghum	cytosol	19.92	44.71
TraesCS2A01G371300.1	Wheat	cytosol	18.04	44.67
HORVU1Hr1G089830.1	Barley	cytosol	18.71	44.55
TraesCS1B01G437500.1	Wheat	cytosol	18.71	44.55
TraesCS2A01G371500.1	Wheat	plastid	20.05	44.48
EES09734	Sorghum	cytosol	18.57	44.37
VIT_06s0009g01450.t01	Wine grape	plastid	14.94	44.05
HORVU2Hr1G114340.4	Barley	endoplasmic reticulum, golgi	21.53	43.84
TraesCS2D01G367400.1	Wheat	plastid	20.46	43.68
OQU85768	Sorghum	cytosol	20.46	42.34
TraesCS2D01G099500.1	Wheat	plastid	21.4	42.29
TraesCS2B01G117000.1	Wheat	plastid	21.4	42.18
HORVU2Hr1G017120.1	Barley	plastid	20.73	41.96
Os07t0685800-01	Rice	plastid	21.0	41.82
KXG36979	Sorghum	plastid	21.0	41.71
TraesCS2A01G100000.2	Wheat	plastid	21.0	41.49
EES17690	Sorghum	cytosol	9.29	41.32
TraesCS1A01G408800.1	Wheat	cytosol	18.84	41.3
VIT_00s0283g00070.t01	Wine grape	cytosol	17.09	40.58
VIT_05s0094g00770.t01	Wine grape	cytosol	16.02	40.07
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	8.48	39.62
HORVU5Hr1G031520.2	Barley	cytosol	12.52	33.21
Os02t0640600-00	Rice	mitochondrion	16.55	33.06
VIT_15s0046g03530.t01	Wine grape	cytosol	10.77	23.39
Os04t0531750-00	Rice	mitochondrion	1.35	3.02

Protein Annotations

EntrezGene:100248285	wikigene:100248285	MapMan:13.3.5.4.2	Gene3D:3.40.50.720	EMBL:AM458305	EMBL:AM479347
ProteinID:CAN64125	ProteinID:CAN64125.1	ProteinID:CAN83209	ProteinID:CAN83209.1	ProteinID:CCB44225	ProteinID:CCB44225.1
UniProt:F6GW90	EMBL:FN594957	EntrezGene:LOC100248285	wikigene:LOC100248285	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106
PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR43490	PANTHER:PTHR43490:SF57	InterPro:SDR_fam
SUPFAM:SSF51735	UniParc:UPI000210A618	ArrayExpress:VIT_06s0061g00620	EnsemblPlantsGene:VIT_06s0061g00620	EnsemblPlants:VIT_06s0061g00620.t01	RefSeq:XP_002275334
RefSeq:XP_002275334.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:+:18134300..18144785

Molecular Weight (calculated)

81563.9 Da

IEP (calculated)

8.335

GRAVY (calculated)

-0.330

Length

743 amino acids

Sequence
(BLAST)

001: MAKRSSTFGS IMRKRLSDIT NSQSQLKVSG QEEKRSPPNN LSAEDYIDQL LKMKAVQHEL ICKEALLKAN NLELEGKAKM NCQKTGIQEV EDKAGEPLPK
101: AHDANRLCKA NRRRPARSQS MGSSTAYQQV EEKETVETKR HCSRRQSCRF KSQQREPNGD LFEIEDAKLP VGWHEGGLAP SNSPIKKEEG DESCVEKHEA
201: RGSQRSSIGR PLRRAAEKVS NAGVSGAIVD WEAIKTLKLE DGKNNTNVAE LLNKASKQTY GLAEECVKTN CYGTKGVTEA LLRCLLLSNS GRIVNVSGGL
301: GKLQFVPSER VRMELNDVDV LSIETVDEIV NEFLKDVKDD MLHDKGWPTQ TSAYTISKAA MNAYTRIVAK SYPSLLINCV CPGFVKTDMT SNTGLFTRGE
401: NHSVLEITIY KKVCIKGYLD KCSVKPSIPL LIQKKMASTT SDSTTMRYAV VTGASKGIGL EICRQLASNG VMVVLTARDE KRGLEAVAKL HESSLSNVVF
501: HQLDVMDANS ITSLATFIVT RYGKLDILVN NAGVTGAIVD WESIGTAIKT LKPEDGKNNA DLAELLHKGM KQTYELAEEC VKTNYYGTKG VTEALFPCLL
601: LSNSGRIVNV SSGLGSLKFV SNERVRMELN DVDVLSVERL DEIVNEFLND VKENTLHDKG WPTQTSAYTI SKAAMNAYTR IVAKSYPSLL INCVCPGFIK
701: TDMTSNTGFF TVEVGAKGPV MLALLPVGGP SGLFFQKMEA STF

Best Arabidopsis Sequence Match ( AT2G24190.1 )
(BLAST)

001: MAEESPRYAI VTGGNRGIGF EICRQLANKG IRVILTSRDE KQGLEAVETL KKELEISDQS IVFHQLDVSD PVSVTSLAEF VKTHFGKLDI LINNAGVGGV
101: ITDVDALRAG TGKEGFKWEE TITETYELAE ECIKINYYGP KRMCEAFIPL LQLSDSPRII NVSSFMGQVK NLVNEWAKGI LSDAENLTEV RIDQVINQLL
201: NDLKEDTAKT KYWAKVMSAY VVSKAGLNAY TRILAKKHPE IRVNSVCPGF VKTDMNFKTG ILSVEEGASS PVRLALLPHQ ESPSGCFFDR KQVSEF

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G24190]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.