Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G367200.1 | Wheat | cytosol | 87.58 | 89.0 |
TraesCS2B01G388100.1 | Wheat | cytosol | 87.26 | 86.98 |
TraesCS2A01G370900.1 | Wheat | cytosol | 85.03 | 86.41 |
KXG26779 | Sorghum | cytosol | 71.34 | 72.03 |
HORVU1Hr1G089830.1 | Barley | cytosol | 54.46 | 54.81 |
KRH40499 | Soybean | cytosol | 17.83 | 50.91 |
HORVU7Hr1G024270.5 | Barley | cytosol | 49.36 | 50.49 |
Bra032567.1-P | Field mustard | cytosol | 18.47 | 49.57 |
VIT_15s0046g03600.t01 | Wine grape | cytosol | 46.82 | 49.33 |
VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 46.18 | 48.82 |
VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 46.18 | 48.82 |
KRH65113 | Soybean | cytosol | 46.18 | 48.49 |
VIT_15s0046g03570.t01 | Wine grape | plastid | 45.86 | 48.48 |
VIT_15s0046g03650.t01 | Wine grape | cytosol | 45.86 | 48.32 |
HORVU2Hr1G091430.7 | Barley | cytosol | 48.09 | 48.24 |
CDX71758 | Canola | cytosol | 45.22 | 47.97 |
AT2G24190.2 | Thale cress | cytosol | 45.86 | 47.84 |
Bra007585.1-P | Field mustard | cytosol | 44.9 | 47.64 |
CDY48937 | Canola | cytosol | 44.9 | 47.64 |
KRH48206 | Soybean | cytosol | 46.18 | 47.54 |
HORVU2Hr1G114340.4 | Barley | endoplasmic reticulum, golgi | 55.1 | 47.4 |
VIT_06s0061g00670.t01 | Wine grape | plastid | 45.86 | 47.37 |
KRH48202 | Soybean | cytosol | 44.9 | 47.16 |
HORVU1Hr1G064390.1 | Barley | cytosol | 46.5 | 47.1 |
KRH48194 | Soybean | cytosol | 44.59 | 46.98 |
CDX89104 | Canola | cytosol | 41.08 | 46.74 |
VIT_15s0046g03550.t01 | Wine grape | cytosol | 44.27 | 46.64 |
KRH00696 | Soybean | mitochondrion | 43.63 | 46.6 |
Bra014448.1-P | Field mustard | cytosol | 43.95 | 46.46 |
KRH48198 | Soybean | cytosol | 42.68 | 46.37 |
Bra032573.1-P | Field mustard | cytosol | 19.75 | 46.27 |
KRH40500 | Soybean | cytosol, nucleus | 43.31 | 46.26 |
VIT_06s0061g00640.t01 | Wine grape | cytosol | 44.59 | 46.05 |
PGSC0003DMT400000067 | Potato | golgi, peroxisome | 42.68 | 46.05 |
KRH00691 | Soybean | cytosol | 37.26 | 45.88 |
PGSC0003DMT400000078 | Potato | cytosol | 43.63 | 45.67 |
KRH65114 | Soybean | cytosol | 42.68 | 45.58 |
Solyc01g094220.2.1 | Tomato | cytosol | 43.31 | 45.33 |
KRH48196 | Soybean | cytosol | 42.68 | 45.27 |
CDY56927 | Canola | endoplasmic reticulum, golgi | 43.95 | 45.1 |
PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 43.63 | 44.77 |
HORVU2Hr1G091440.3 | Barley | mitochondrion | 50.64 | 44.66 |
Solyc01g099560.2.1 | Tomato | cytosol | 25.16 | 44.63 |
Solyc01g094210.2.1 | Tomato | cytosol | 42.04 | 44.44 |
Solyc11g071460.1.1 | Tomato | cytosol | 42.04 | 44.15 |
PGSC0003DMT400048179 | Potato | cytosol | 42.04 | 44.15 |
AT1G01800.1 | Thale cress | cytosol | 41.4 | 44.07 |
PGSC0003DMT400088659 | Potato | cytosol | 16.56 | 44.07 |
CDY15148 | Canola | cytosol | 41.4 | 44.07 |
PGSC0003DMT400048181 | Potato | cytosol | 41.72 | 43.81 |
Bra033230.1-P | Field mustard | cytosol | 41.08 | 43.73 |
VIT_02s0025g04510.t01 | Wine grape | cytosol | 27.71 | 43.72 |
Solyc01g094270.2.1 | Tomato | cytosol, plastid | 43.63 | 43.49 |
CDX90062 | Canola | cytosol | 40.76 | 43.39 |
HORVU5Hr1G031560.1 | Barley | cytosol | 17.52 | 43.31 |
AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 44.27 | 42.51 |
PGSC0003DMT400047834 | Potato | cytosol | 40.13 | 42.14 |
KRH17659 | Soybean | cytosol | 13.06 | 41.84 |
Solyc01g094240.2.1 | Tomato | cytosol | 42.36 | 41.82 |
Solyc01g094260.2.1 | Tomato | cytosol | 42.36 | 41.69 |
Solyc01g094250.2.1 | Tomato | cytosol | 41.72 | 41.07 |
KRH65115 | Soybean | cytosol | 42.36 | 40.92 |
PGSC0003DMT400026580 | Potato | cytosol | 39.49 | 40.0 |
PGSC0003DMT400048175 | Potato | cytosol, peroxisome, plastid | 15.92 | 39.37 |
Solyc10g017570.2.1 | Tomato | cytosol | 38.85 | 39.35 |
VIT_06s0009g01450.t01 | Wine grape | plastid | 30.89 | 38.49 |
HORVU2Hr1G085650.1 | Barley | cytosol, peroxisome | 28.66 | 38.14 |
HORVU6Hr1G055660.3 | Barley | cytosol, peroxisome, plastid | 34.08 | 36.64 |
HORVU5Hr1G031520.2 | Barley | cytosol | 31.21 | 35.0 |
HORVU2Hr1G017120.1 | Barley | plastid | 40.76 | 34.88 |
KRH40504 | Soybean | endoplasmic reticulum | 42.68 | 34.36 |
Solyc11g042710.1.1 | Tomato | cytosol | 17.2 | 34.18 |
HORVU3Hr1G096690.3 | Barley | cytosol | 33.76 | 32.92 |
VIT_15s0046g03530.t01 | Wine grape | cytosol | 22.29 | 20.47 |
VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 45.86 | 19.38 |
Protein Annotations
EnsemblPlants:HORVU2Hr1G091460.1 | EnsemblPlantsGene:HORVU2Hr1G091460 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
PANTHER:PTHR43490:SF13 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
UniParc:UPI000B47C254 | UniProt:A0A287IXD2 | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:648082052..648083642
Molecular Weight (calculated)
34597.5 Da
IEP (calculated)
6.995
GRAVY (calculated)
-0.061
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: VLTFHHSEFN LCRSVFLSRV AVVTGGNKGI GLEVCRQLAS KGVAVLLTSR DETRGKEAAR RLHASGLPDV VYHKLDVSDP SSAACLAEFV KNKFGKLDIL
101: INNAGVIGAT AQIDTTAPLK DLVGKNATER LQWLLEHSTE TYEEAEECLR INYFGTKYVT EALLPLLHAS SDGRLVNVSS NYGLLRYFSS EDLKQELNNI
201: EKLTIVRLDE MSRLFLCDYK NGQLKSHGWP ADAEYLAYKV SKALINGYTR IMAKNFPALR VNSVHPGYCM TDINYHSGEL TAEEGAGSIV MVALLPAGGP
301: TSVFFYRYEV APVV
101: INNAGVIGAT AQIDTTAPLK DLVGKNATER LQWLLEHSTE TYEEAEECLR INYFGTKYVT EALLPLLHAS SDGRLVNVSS NYGLLRYFSS EDLKQELNNI
201: EKLTIVRLDE MSRLFLCDYK NGQLKSHGWP ADAEYLAYKV SKALINGYTR IMAKNFPALR VNSVHPGYCM TDINYHSGEL TAEEGAGSIV MVALLPAGGP
301: TSVFFYRYEV APVV
001: MAEESPSSGL CRYAIVTGGN RGIGFEICRQ LANKGIRVIL TSRDEKQGLE AVETLKKELE ISDQSIVFHQ LDVSDPVSVT SLAEFVKTHF GKLDILINNA
101: GVGGVITDVD ALRAGTGKEG FKWEETITET YELAEECIKI NYYGPKRMCE AFIPLLQLSD SPRIINVSSF MGQVKNLVNE WAKGILSDAE NLTEVRIDQV
201: INQLLNDLKE DTAKTKYWAK VMSAYVVSKA GLNAYTRILA KKHPEIRVNS VCPGFVKTDM NFKTGILSVE EGASSPVRLA LLPHQESPSG CFFDRKQVSE
301: F
101: GVGGVITDVD ALRAGTGKEG FKWEETITET YELAEECIKI NYYGPKRMCE AFIPLLQLSD SPRIINVSSF MGQVKNLVNE WAKGILSDAE NLTEVRIDQV
201: INQLLNDLKE DTAKTKYWAK VMSAYVVSKA GLNAYTRILA KKHPEIRVNS VCPGFVKTDM NFKTGILSVE EGASSPVRLA LLPHQESPSG CFFDRKQVSE
301: F
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G24190]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.