Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048181 | Potato | cytosol | 96.66 | 96.66 |
| PGSC0003DMT400048179 | Potato | cytosol | 96.66 | 96.66 |
| Solyc11g042710.1.1 | Tomato | cytosol | 35.79 | 67.72 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 54.85 | 65.08 |
| TraesCS2A01G099800.1 | Wheat | cytosol | 58.19 | 55.41 |
| TraesCS2D01G099300.1 | Wheat | cytosol | 57.19 | 54.46 |
| TraesCS2B01G116700.1 | Wheat | mitochondrion | 57.19 | 54.46 |
| Solyc01g094220.2.1 | Tomato | cytosol | 52.51 | 52.33 |
| OQU82017 | Sorghum | extracellular | 28.43 | 51.52 |
| EER97757 | Sorghum | cytosol | 56.19 | 50.76 |
| TraesCS2A01G516200.2 | Wheat | mitochondrion | 50.17 | 49.34 |
| TraesCS2B01G388700.1 | Wheat | cytosol, plastid | 49.83 | 48.69 |
| Solyc01g099560.2.1 | Tomato | cytosol | 28.76 | 48.59 |
| EES07551 | Sorghum | cytosol | 48.83 | 48.18 |
| EES11175 | Sorghum | cytosol, plastid | 48.16 | 48.16 |
| EES11174 | Sorghum | cytosol | 49.83 | 48.06 |
| TraesCS2D01G517700.1 | Wheat | cytosol | 49.5 | 48.05 |
| TraesCS2B01G544800.1 | Wheat | cytosol | 49.16 | 47.73 |
| EES07552 | Sorghum | cytosol | 49.16 | 47.73 |
| Os07t0685800-01 | Rice | plastid | 59.53 | 47.72 |
| Os04t0531900-01 | Rice | cytosol, plastid | 48.83 | 47.56 |
| TraesCS2D01G367800.1 | Wheat | cytosol, plastid | 48.49 | 47.39 |
| TraesCS2A01G371100.1 | Wheat | cytosol | 48.16 | 47.21 |
| TraesCS2B01G388600.1 | Wheat | cytosol, plastid | 48.16 | 47.06 |
| TraesCS7A01G114100.1 | Wheat | cytosol | 48.16 | 46.91 |
| HORVU2Hr1G017120.1 | Barley | plastid | 57.53 | 46.87 |
| TraesCS2A01G371400.1 | Wheat | cytosol, plastid | 47.83 | 46.73 |
| HORVU7Hr1G024270.5 | Barley | cytosol | 47.83 | 46.58 |
| TraesCS2D01G099500.1 | Wheat | plastid | 58.53 | 46.54 |
| TraesCS2B01G117000.1 | Wheat | plastid | 58.53 | 46.42 |
| TraesCS2A01G100000.2 | Wheat | plastid | 58.19 | 46.28 |
| Os04t0532400-01 | Rice | cytosol | 47.49 | 46.25 |
| EES11167 | Sorghum | cytosol | 47.83 | 46.13 |
| Solyc01g094210.2.1 | Tomato | cytosol | 45.82 | 46.13 |
| EES11171 | Sorghum | cytosol | 47.83 | 45.98 |
| TraesCS2D01G367700.1 | Wheat | mitochondrion | 47.49 | 45.95 |
| TraesCS2A01G371200.1 | Wheat | cytosol | 46.82 | 45.9 |
| TraesCS2B01G388300.1 | Wheat | cytosol | 47.83 | 45.83 |
| EES11173 | Sorghum | cytosol | 47.49 | 45.66 |
| Os04t0532100-01 | Rice | cytosol | 47.16 | 45.63 |
| TraesCS2B01G388200.2 | Wheat | cytosol | 41.14 | 45.56 |
| TraesCS1D01G415900.1 | Wheat | cytosol | 47.49 | 45.51 |
| TraesCS2A01G371000.1 | Wheat | cytosol | 46.82 | 45.45 |
| Solyc01g094270.2.1 | Tomato | cytosol, plastid | 47.83 | 45.4 |
| TraesCS2A01G371300.1 | Wheat | cytosol | 45.15 | 45.0 |
| TraesCS2A01G370900.1 | Wheat | cytosol | 46.15 | 44.66 |
| HORVU1Hr1G089830.1 | Barley | cytosol | 46.49 | 44.55 |
| EES07554 | Sorghum | cytosol | 45.82 | 44.48 |
| HORVU2Hr1G091430.7 | Barley | cytosol | 46.49 | 44.41 |
| KXG26779 | Sorghum | cytosol | 46.15 | 44.37 |
| Solyc10g017570.2.1 | Tomato | cytosol | 45.82 | 44.19 |
| TraesCS7A01G111500.1 | Wheat | cytosol | 32.78 | 44.14 |
| KXG31133 | Sorghum | cytosol | 42.81 | 44.14 |
| KXG36979 | Sorghum | plastid | 55.18 | 44.12 |
| Os04t0531700-01 | Rice | mitochondrion | 16.05 | 44.04 |
| TraesCS2D01G367200.1 | Wheat | cytosol | 45.48 | 44.01 |
| TraesCS2D01G367600.2 | Wheat | plastid | 46.15 | 43.95 |
| EER93229 | Sorghum | cytosol | 46.15 | 43.95 |
| EES09734 | Sorghum | cytosol | 45.48 | 43.73 |
| EES07553 | Sorghum | cytosol | 45.15 | 43.69 |
| TraesCS1B01G437500.1 | Wheat | cytosol | 45.48 | 43.59 |
| TraesCS2A01G371500.1 | Wheat | plastid | 48.83 | 43.58 |
| Solyc01g094250.2.1 | Tomato | cytosol | 46.49 | 43.57 |
| Solyc01g094240.2.1 | Tomato | cytosol | 46.15 | 43.4 |
| HORVU5Hr1G031560.1 | Barley | cytosol | 18.39 | 43.31 |
| Solyc01g094260.2.1 | Tomato | cytosol | 46.15 | 43.26 |
| HORVU1Hr1G064390.1 | Barley | cytosol | 44.82 | 43.23 |
| TraesCS2B01G388100.1 | Wheat | cytosol | 45.48 | 43.17 |
| KXG31187 | Sorghum | mitochondrion | 42.81 | 43.1 |
| HORVU2Hr1G091460.1 | Barley | cytosol, mitochondrion, plastid | 44.15 | 42.04 |
| HORVU2Hr1G114340.4 | Barley | endoplasmic reticulum, golgi | 50.84 | 41.64 |
| TraesCS2B01G388500.1 | Wheat | cytosol, mitochondrion, nucleus | 22.07 | 41.51 |
| TraesCS2D01G367400.1 | Wheat | plastid | 48.16 | 41.38 |
| EES17690 | Sorghum | cytosol | 23.08 | 41.32 |
| HORVU2Hr1G091440.3 | Barley | mitochondrion | 48.49 | 40.73 |
| TraesCS1A01G408800.1 | Wheat | cytosol | 46.15 | 40.71 |
| OQU85768 | Sorghum | cytosol | 47.49 | 39.55 |
| Solyc12g042370.1.1 | Tomato | cytosol | 40.8 | 38.73 |
| Solyc06g068740.2.1 | Tomato | cytosol | 39.46 | 37.7 |
| Solyc03g118100.2.1 | Tomato | cytoskeleton, cytosol, nucleus | 39.13 | 37.38 |
| Solyc03g059190.2.1 | Tomato | cytosol, peroxisome, plastid | 35.79 | 36.03 |
| HORVU5Hr1G031520.2 | Barley | cytosol | 30.1 | 32.14 |
| Os02t0640600-00 | Rice | mitochondrion | 34.78 | 27.96 |
| Os04t0531750-00 | Rice | mitochondrion | 4.01 | 3.63 |
Protein Annotations
| EnsemblPlants:Solyc11g071460.1.1 | EnsemblPlantsGene:Solyc11g071460.1 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS |
| PANTHER:PTHR43490 | PANTHER:PTHR43490:SF40 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 |
| SUPFAM:SSF51735 | UniParc:UPI00027696C0 | UniProt:K4DAK3 | MapMan:50.1.1 | : | : |
Description
No Description!
Coordinates
chr11:-:54919307..54921453
Molecular Weight (calculated)
32927.5 Da
IEP (calculated)
5.217
GRAVY (calculated)
-0.157
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDVCRYAVV TGANKGIGFE TVKQLAKSGV TVILTARNEK RGMGATSLLN EQGLSNVVFH QLDVQDAKSI ESLAKFIQTQ YGRLDILVNN AGASGVVVDE
101: DVLRALNVDP EDWLAGKAVN VIQVAMKTTY ESAKLCLDTN YYGVKNVTEA LLPLLQNSPS ARIVNVSSLR SELKRVPNEE RRKELGDVEN LTEDKLDKIL
201: QNFLHDLKQD ALEVNGWQMM LPAYSISKVS LNAYTRILAR KYPKMCINCV HPGYVNTDIN WHTGTMPVEE GAEGSVMLAL LPDGGPTGCY FDRTVVDEF
101: DVLRALNVDP EDWLAGKAVN VIQVAMKTTY ESAKLCLDTN YYGVKNVTEA LLPLLQNSPS ARIVNVSSLR SELKRVPNEE RRKELGDVEN LTEDKLDKIL
201: QNFLHDLKQD ALEVNGWQMM LPAYSISKVS LNAYTRILAR KYPKMCINCV HPGYVNTDIN WHTGTMPVEE GAEGSVMLAL LPDGGPTGCY FDRTVVDEF
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.