Factsheet for Solyc06g068740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400065718	Potato	cytosol, mitochondrion	85.3	96.74
Solyc03g118100.2.1	Tomato	cytoskeleton, cytosol, nucleus	79.55	79.55
Solyc12g042370.1.1	Tomato	cytosol	79.87	79.37
KRH38194	Soybean	cytosol	70.61	70.61
VIT_00s0283g00070.t01	Wine grape	cytosol	69.97	69.97
KRH59720	Soybean	cytosol	67.41	67.2
KRH41047	Soybean	cytosol	67.09	66.88
KRH63893	Soybean	cytosol	67.09	66.88
CDY45793	Canola	cytosol	65.18	65.81
CDX84895	Canola	cytosol	65.18	65.81
Bra022746.1-P	Field mustard	cytosol	65.18	65.81
AT5G51030.1	Thale cress	cytosol	65.81	65.61
KRH00830	Soybean	cytosol	25.24	65.29
GSMUA_Achr4P15900_001	Banana	cytosol	65.81	65.19
KRG94236	Soybean	plastid	62.62	63.64
KRH54068	Soybean	cytosol	66.77	62.2
HORVU3Hr1G096690.3	Barley	cytosol	62.3	60.56
Zm00001d042250_P001	Maize	cytosol	62.3	60.19
EES04148	Sorghum	cytosol	62.3	60.19
Os01t0929500-01	Rice	cytosol	62.62	59.39
TraesCS3D01G436600.1	Wheat	cytosol	61.02	59.32
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	60.38	58.88
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	60.06	58.39
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	39.94	42.09
Solyc10g017570.2.1	Tomato	cytosol	40.26	40.65
Solyc11g071460.1.1	Tomato	cytosol	37.7	39.46
Solyc01g094220.2.1	Tomato	cytosol	37.7	39.33
Solyc01g094250.2.1	Tomato	cytosol	38.02	37.3
Solyc01g094260.2.1	Tomato	cytosol	38.02	37.3
Solyc01g094210.2.1	Tomato	cytosol	35.14	37.04
Solyc01g094270.2.1	Tomato	cytosol, plastid	36.74	36.51
Solyc01g094240.2.1	Tomato	cytosol	36.42	35.85
Solyc01g099560.2.1	Tomato	cytosol	20.13	35.59
Solyc11g042710.1.1	Tomato	cytosol	17.89	35.44

Protein Annotations

EnsemblPlants:Solyc06g068740.2.1	EnsemblPlantsGene:Solyc06g068740.2	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490
PANTHER:PTHR43490:SF54	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
UniParc:UPI0002766592	UniProt:K4C848	MapMan:50.1.1	:	:	:

Description

No Description!

Coordinates

chr6:+:42608522..42611825

Molecular Weight (calculated)

35336.8 Da

IEP (calculated)

6.376

GRAVY (calculated)

-0.387

Length

313 amino acids

Sequence
(BLAST)

001: MGKKERAQER REQRRQEISL LRTIPYSDQQ RWWSNETIAV VTGSNRGIGF EIAHQLASHG LTVVLTSRET RVGEEATKIM QEKGLNVVFH QLDIVDPVSV
101: ETFSDWIKEN YGGLDILINN AGVNFNFGTD NSVEYAETVI QTNYFGTKSM TKAMIPLMRP SPFGARIVNV TSRLGRLNGR RNRIANVSLR QQLEDVDSLS
201: EELIDSTVNS FLEQVKNGTW ESGGWPQVFT DYSLSKLAAN AYTRLMARIL SDQPEGHKIY MNCYCPGWVK TAMTDWAGHT SPEVAADTAV WLALTSDQIV
301: SGKFFAERRE INF

Best Arabidopsis Sequence Match ( AT5G61830.1 )
(BLAST)

001: MTNKEKARER REKRMQEISL LRTIPYSDHH RWWSCENVAV VTGSNRGIGF EIARQLAVHG LTVVLTARNV NAGLEAVKSL RHQEEGLKVY FHQLDVTDSS
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF

Arabidopsis Description

At5g61830 [Source:UniProtKB/TrEMBL;Acc:Q501A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.