Factsheet for TraesCS3B01G477700.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 2
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G436600.1	Wheat	cytosol	97.2	96.89
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	96.57	96.27
HORVU3Hr1G096690.3	Barley	cytosol	94.39	94.1
EES04148	Sorghum	cytosol	81.93	81.17
Os01t0929500-01	Rice	cytosol	83.18	80.91
Zm00001d042250_P001	Maize	cytosol	79.75	79.01
GSMUA_Achr4P15900_001	Banana	cytosol	66.36	67.41
VIT_00s0283g00070.t01	Wine grape	cytosol	61.06	62.62
PGSC0003DMT400065718	Potato	cytosol, mitochondrion	52.34	60.87
Solyc06g068740.2.1	Tomato	cytosol	58.88	60.38
KRH38194	Soybean	cytosol	58.57	60.06
Solyc12g042370.1.1	Tomato	cytosol	57.01	58.1
KRH41047	Soybean	cytosol	56.7	57.96
CDY00233	Canola	cytosol	57.01	57.91
Bra019617.1-P	Field mustard	cytosol	57.01	57.91
Solyc03g118100.2.1	Tomato	cytoskeleton, cytosol, nucleus	56.39	57.83
PGSC0003DMT400036929	Potato	cytoskeleton, cytosol, nucleus	56.39	57.83
PGSC0003DMT400037433	Potato	cytosol	56.7	57.78
CDY53157	Canola	cytosol	56.7	57.59
KRH59720	Soybean	cytosol	56.07	57.32
AT5G61830.1	Thale cress	cytosol	56.39	57.28
KRH63893	Soybean	cytosol	55.45	56.69
KRG94236	Soybean	plastid	53.58	55.84
Bra022746.1-P	Field mustard	cytosol	53.58	55.48
CDX84895	Canola	cytosol	53.58	55.48
CDY45793	Canola	cytosol	53.58	55.48
AT5G51030.1	Thale cress	cytosol	54.21	55.41
KRH54068	Soybean	cytosol	53.89	51.49
TraesCS2B01G371400.1	Wheat	peroxisome	42.37	46.58
TraesCS6B01G247400.1	Wheat	peroxisome	40.5	44.52
KRH00830	Soybean	cytosol	16.2	42.98
TraesCS2B01G388600.1	Wheat	cytosol, plastid	33.33	34.97
TraesCS1B01G437500.1	Wheat	cytosol	33.96	34.94
TraesCS2B01G388300.1	Wheat	cytosol	33.33	34.29
TraesCS2B01G544800.1	Wheat	cytosol	32.71	34.09
TraesCS2B01G388700.1	Wheat	cytosol, plastid	32.09	33.66
TraesCS2B01G388100.1	Wheat	cytosol	32.71	33.33
TraesCS2B01G116700.1	Wheat	mitochondrion	32.4	33.12
TraesCS2B01G388200.2	Wheat	cytosol	26.79	31.85
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	13.71	27.67
TraesCS2B01G117000.1	Wheat	plastid	32.4	27.59

Protein Annotations

EnsemblPlants:TraesCS3B01G477700.1	EnsemblPlantsGene:TraesCS3B01G477700	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	InterPro:Sc_DH/Rdtase_CS	PANTHER:PTHR43490
PANTHER:PTHR43490:SF54	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	SEG:seg
SUPFAM:SSF51735	TIGR:cd05324	MapMan:50.1.1	:	:	:

Description

No Description!

Coordinates

chr3B:-:726441402..726442854

Molecular Weight (calculated)

35992.7 Da

IEP (calculated)

8.761

GRAVY (calculated)

-0.414

Length

321 amino acids

Sequence
(BLAST)

001: MGKKGKAAAR ERREERRREV TLLRAVPYEP HQRWWDGLAP ARAVAVVTGA SRGIGYEISR QLARHGLHVV LASRDAARGR DAAEGILREE GTSAEWRQLD
101: VADAASVEAF AAWTARTHGG IHVLINNAGV NFNRGADNSV EFAEQVIETN YFGTRRMIEA MLPLLKPSPY GGRIVNVSSR LGRANGRRNK IGDAILREQL
201: LTDDCLSEEL IDGMVTKFLE QVKQNSWSSI EWPQMYTDYS VSKFAVNVYT RLMARRLSDR SEGQKIYINC FCPGWVKTAM TDWEGNISAE EGADTGVWLA
301: LLPQEQATIG KFYAERREIS F

Best Arabidopsis Sequence Match ( AT5G61830.1 )
(BLAST)

001: MTNKEKARER REKRMQEISL LRTIPYSDHH RWWSCENVAV VTGSNRGIGF EIARQLAVHG LTVVLTARNV NAGLEAVKSL RHQEEGLKVY FHQLDVTDSS
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF

Arabidopsis Description

At5g61830 [Source:UniProtKB/TrEMBL;Acc:Q501A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.