CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94236	Soybean	plastid	82.11	83.44
KRH41047	Soybean	cytosol	77.64	77.39
KRH59720	Soybean	cytosol	77.32	77.07
KRH63893	Soybean	cytosol	77.0	76.75
KRH00830	Soybean	cytosol	29.07	75.21
KRH54068	Soybean	cytosol	76.04	70.83
Solyc06g068740.2.1	Tomato	cytosol	70.61	70.61
VIT_00s0283g00070.t01	Wine grape	cytosol	69.97	69.97
PGSC0003DMT400065718	Potato	cytosol, mitochondrion	60.7	68.84
Solyc03g118100.2.1	Tomato	cytoskeleton, cytosol, nucleus	68.69	68.69
PGSC0003DMT400036929	Potato	cytoskeleton, cytosol, nucleus	68.69	68.69
Solyc12g042370.1.1	Tomato	cytosol	67.73	67.3
PGSC0003DMT400037433	Potato	cytosol	67.41	66.98
AT5G51030.1	Thale cress	cytosol	66.13	65.92
GSMUA_Achr4P15900_001	Banana	cytosol	65.81	65.19
CDY45793	Canola	cytosol	63.58	64.19
CDX84895	Canola	cytosol	63.58	64.19
Bra022746.1-P	Field mustard	cytosol	63.58	64.19
Zm00001d042250_P001	Maize	cytosol	64.22	62.04
EES04148	Sorghum	cytosol	62.62	60.49
HORVU3Hr1G096690.3	Barley	cytosol	61.66	59.94
Os01t0929500-01	Rice	cytosol	62.94	59.7
TraesCS3D01G436600.1	Wheat	cytosol	60.7	59.01
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	60.06	58.57
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	59.42	57.76
KRH40499	Soybean	cytosol	15.97	45.45
KRH48198	Soybean	cytosol	40.89	44.29
KRH00696	Soybean	mitochondrion	41.53	44.22
KRH48196	Soybean	cytosol	41.53	43.92
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	40.58	41.91
KRH50192	Soybean	cytosol	40.26	41.58
KRH40500	Soybean	cytosol, nucleus	38.98	41.5
KRH00691	Soybean	cytosol	33.55	41.18
KRH48194	Soybean	cytosol	37.38	39.26
KRH48202	Soybean	cytosol	37.38	39.13
KRH65114	Soybean	cytosol	36.74	39.12
KRH65115	Soybean	cytosol	40.58	39.08
KRH65113	Soybean	cytosol	36.74	38.46
KRH48206	Soybean	cytosol	36.74	37.7
KRH17659	Soybean	cytosol	10.22	32.65
KRH40504	Soybean	endoplasmic reticulum	39.62	31.79

Protein Annotations

EMBL:ACUP02005751	EnsemblPlants:KRH38194	EnsemblPlantsGene:GLYMA_09G117300	EntrezGene:100790340	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR43490	PANTHER:PTHR43490:SF54	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081
ProteinID:KRH38194	ProteinID:KRH38194.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002338309	UniProt:I1L2S0
MapMan:50.1.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:27563782..27567266

Molecular Weight (calculated)

35151.8 Da

IEP (calculated)

8.294

GRAVY (calculated)

-0.362

Length

313 amino acids

Sequence
(BLAST)

001: MGKKEKAKER REQRLQEIHL QRTIPYSHHQ RWWSKETVAV VTGGNRGIGF EICRQLATHG LTVILTSRDA SAGVESVKAL QEGGLSVVYH QLDVVDYSSI
101: NQFVEWLREN CGGLDILVNN AGVNFNLGSD NSVENARKVI ETNYYGTKRM TEAIISLMKP SLVGARIVNV SSRLGRLNGR RNRISNVALR EQLSDVESLS
201: EELIGMTLST FLQQAEDGTW TTEGWPQVYT DYSVSKLAVN AYTRLMARKL SERPEGQKIY INCYCPGWVK TALTGYAGNN TVEEGADTGV WLALLSDQTF
301: MGKFFAERRE INF

Best Arabidopsis Sequence Match ( AT5G51030.1 )
(BLAST)

001: MVGSKEKSKE KRDKRLQEIS LLRTIPYSDH QRWWTSETVA VVTGANRGIG FEMVRQLAGH GLTVILTSRD ENVGVEAAKI LQEGGFNVDF HRLDILDSSS
101: IQEFCEWIKE KYGFIDVLIN NAGVNYNVGS DNSVEFSHMV ISTNYYGTKN IINAMIPLMR HACQGARIVN VTSRLGRLKG RHSKLENEDV RAKLMDVDSL
201: TEEIVDKTVS EFLKQVEEGT WESGGWPHSF TDYSVSKMAV NAYTRVLAKE LSERPEGEKI YANCFCPGWV KTAMTGYAGN VSAEDGADTG VWLALLPDQA
301: ITGKFFAERR EISF

Arabidopsis Description

At5g51030 [Source:UniProtKB/TrEMBL;Acc:Q9FI45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.