Factsheet for PGSC0003DMT400065718

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 24351685

msms PMID: 24351685 doi

F Salvato, JF Havelund, M Chen, RS Rao, A Rogowska-Wrzesinska, ON Jensen, DR Gang, JJ Thelen, IM Møller

Department of Biochemistry and Interdisciplinary Plant Group, University of Missouri, Columbia, Missouri 65211.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g068740.2.1	Tomato	cytosol	96.74	85.3
PGSC0003DMT400037433	Potato	cytosol	81.88	71.75
PGSC0003DMT400036929	Potato	cytoskeleton, cytosol, nucleus	80.43	70.93
KRG94236	Soybean	plastid	67.75	60.71
KRH38194	Soybean	cytosol	68.84	60.7
VIT_00s0283g00070.t01	Wine grape	cytosol	68.48	60.38
CDY45793	Canola	cytosol	66.3	59.03
CDX84895	Canola	cytosol	66.3	59.03
Bra022746.1-P	Field mustard	cytosol	66.3	59.03
KRH59720	Soybean	cytosol	67.03	58.92
KRH63893	Soybean	cytosol	67.03	58.92
KRH41047	Soybean	cytosol	66.3	58.28
AT5G51030.1	Thale cress	cytosol	65.58	57.64
GSMUA_Achr4P15900_001	Banana	cytosol	65.22	56.96
KRH54068	Soybean	cytosol	66.67	54.76
HORVU3Hr1G096690.3	Barley	cytosol	62.68	53.73
EES04148	Sorghum	cytosol	63.04	53.7
Zm00001d042250_P001	Maize	cytosol	62.32	53.09
TraesCS3D01G436600.1	Wheat	cytosol	61.23	52.48
Os01t0929500-01	Rice	cytosol	62.68	52.42
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	60.87	52.34
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	60.87	52.17
KRH00830	Soybean	cytosol	19.93	45.45
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	18.84	42.28
PGSC0003DMT400026580	Potato	cytosol	44.57	39.68
PGSC0003DMT400000078	Potato	cytosol	42.39	39.0
PGSC0003DMT400047834	Potato	cytosol	42.03	38.8
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	17.75	38.58
PGSC0003DMT400048179	Potato	cytosol	41.67	38.46
PGSC0003DMT400048181	Potato	cytosol	41.3	38.13
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	41.3	37.25
PGSC0003DMT400000067	Potato	golgi, peroxisome	39.13	37.11
PGSC0003DMT400088659	Potato	cytosol	14.49	33.9

Protein Annotations

EnsemblPlants:PGSC0003DMT400065718	EnsemblPlantsGene:PGSC0003DMG400025573	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490
PANTHER:PTHR43490:SF54	PFAM:PF00106	PGSC:PGSC0003DMG400025573	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI000294969B	UniProt:M1CEH0	MapMan:50.1.1	:	:

Description

Carbonyl reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400025573]

Coordinates

chr6:+:50416872..50419135

Molecular Weight (calculated)

30798.5 Da

IEP (calculated)

5.687

GRAVY (calculated)

-0.212

Length

276 amino acids

Sequence
(BLAST)

001: MAVVTGSNRG IGFEIAHQLA SHGLTVVLTS RETRVGEEAT KIMQEKGLNV VFHQLDIVDP ASIETFSDWI KENYGGLDIL INNAGVNFNF GTDNSVEYAE
101: TVIRTNYFGT KSMIKTMIPL MRPSPFGARI VNVTSRLGRL NGRRNRIANV SLRQQLEDND SLSEELIDST VNSFLEQVKN GTWESGGWPQ VFTDYSLSKL
201: AANAYTRLMA RILSDQPEGH KIYMNCYCPG WVKTAMTDWA GHTSPEVAAD TAVWLALISD QFVSGKFFAE RREINF

Best Arabidopsis Sequence Match ( AT5G61830.1 )
(BLAST)

001: MTNKEKARER REKRMQEISL LRTIPYSDHH RWWSCENVAV VTGSNRGIGF EIARQLAVHG LTVVLTARNV NAGLEAVKSL RHQEEGLKVY FHQLDVTDSS
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF

Arabidopsis Description

At5g61830 [Source:UniProtKB/TrEMBL;Acc:Q501A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.