Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G477700.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 94.1 | 94.39 |
| TraesCS3D01G436600.1 | Wheat | cytosol | 94.1 | 94.1 |
| TraesCS3A01G444300.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 93.17 | 93.17 |
| EES04148 | Sorghum | cytosol | 83.23 | 82.72 |
| Os01t0929500-01 | Rice | cytosol | 82.61 | 80.61 |
| Zm00001d042250_P001 | Maize | cytosol | 80.75 | 80.25 |
| GSMUA_Achr4P15900_001 | Banana | cytosol | 67.39 | 68.67 |
| VIT_00s0283g00070.t01 | Wine grape | cytosol | 61.49 | 63.26 |
| PGSC0003DMT400065718 | Potato | cytosol, mitochondrion | 53.73 | 62.68 |
| Solyc06g068740.2.1 | Tomato | cytosol | 60.56 | 62.3 |
| KRH38194 | Soybean | cytosol | 59.94 | 61.66 |
| Bra019617.1-P | Field mustard | cytosol | 58.7 | 59.81 |
| CDY00233 | Canola | cytosol | 58.7 | 59.81 |
| AT5G61830.1 | Thale cress | cytosol | 58.39 | 59.49 |
| CDY53157 | Canola | cytosol | 58.39 | 59.49 |
| KRH41047 | Soybean | cytosol | 57.45 | 58.92 |
| PGSC0003DMT400037433 | Potato | cytosol | 57.45 | 58.73 |
| Solyc03g118100.2.1 | Tomato | cytoskeleton, cytosol, nucleus | 56.83 | 58.47 |
| PGSC0003DMT400036929 | Potato | cytoskeleton, cytosol, nucleus | 56.83 | 58.47 |
| Solyc12g042370.1.1 | Tomato | cytosol | 57.14 | 58.41 |
| KRH59720 | Soybean | cytosol | 56.83 | 58.28 |
| KRH63893 | Soybean | cytosol | 56.52 | 57.96 |
| KRG94236 | Soybean | plastid | 55.28 | 57.79 |
| Bra022746.1-P | Field mustard | cytosol | 53.11 | 55.16 |
| CDX84895 | Canola | cytosol | 53.11 | 55.16 |
| CDY45793 | Canola | cytosol | 53.11 | 55.16 |
| AT5G51030.1 | Thale cress | cytosol | 53.73 | 55.1 |
| KRH54068 | Soybean | cytosol | 54.97 | 52.68 |
| HORVU2Hr1G085650.1 | Barley | cytosol, peroxisome | 34.47 | 47.03 |
| HORVU6Hr1G055660.3 | Barley | cytosol, peroxisome, plastid | 41.93 | 46.23 |
| KRH00830 | Soybean | cytosol | 16.77 | 44.63 |
| HORVU7Hr1G024270.5 | Barley | cytosol | 35.09 | 36.81 |
| HORVU1Hr1G064390.1 | Barley | cytosol | 34.47 | 35.81 |
| HORVU1Hr1G089830.1 | Barley | cytosol | 34.16 | 35.26 |
| HORVU5Hr1G031560.1 | Barley | cytosol | 13.66 | 34.65 |
| HORVU2Hr1G091430.7 | Barley | cytosol | 33.23 | 34.19 |
| HORVU2Hr1G091460.1 | Barley | cytosol, mitochondrion, plastid | 32.92 | 33.76 |
| HORVU2Hr1G091440.3 | Barley | mitochondrion | 34.16 | 30.9 |
| HORVU2Hr1G114340.4 | Barley | endoplasmic reticulum, golgi | 34.47 | 30.41 |
| HORVU2Hr1G017120.1 | Barley | plastid | 34.16 | 29.97 |
| HORVU5Hr1G031520.2 | Barley | cytosol | 21.43 | 24.64 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G096690.3 | EnsemblPlantsGene:HORVU3Hr1G096690 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS |
| PANTHER:PTHR43490 | PANTHER:PTHR43490:SF54 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000B47FB67 | UniProt:A0A287MF74 | MapMan:50.1.1 | : |
Description
No Description!
Coordinates
chrchr3H:+:653836731..653838461
Molecular Weight (calculated)
36048.8 Da
IEP (calculated)
8.864
GRAVY (calculated)
-0.387
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKKGKAAAR ERREERRREV TLLRAVPYEP HQRWWDGLAP ARAVAVVTGA SRGIGYEISR QLARHGLHVV LASRDAARGR DAAERILREA EEAGAEWRQL
101: DVADAASVEA FAAWTARTHG GIHILVNNAG VNFNRGADNS VEFAEQVIQT NYFGTKRMIE AMLPLLKPSP YGARIVNVSS RLGRANGRRN KIGDASLREQ
201: LLSDDCLSEE LIDGMVTKFL EQVKQNSWSS IEWPQMYTDY SVSKLAVNVY TRLMARRLSD RSEGQKIYIN CFCPGWVKTA MTDWEGNISA EEGADSGVWL
301: ALLSQELCTV GKFFAERREI SF
101: DVADAASVEA FAAWTARTHG GIHILVNNAG VNFNRGADNS VEFAEQVIQT NYFGTKRMIE AMLPLLKPSP YGARIVNVSS RLGRANGRRN KIGDASLREQ
201: LLSDDCLSEE LIDGMVTKFL EQVKQNSWSS IEWPQMYTDY SVSKLAVNVY TRLMARRLSD RSEGQKIYIN CFCPGWVKTA MTDWEGNISA EEGADSGVWL
301: ALLSQELCTV GKFFAERREI SF
001: MTNKEKARER REKRMQEISL LRTIPYSDHH RWWSCENVAV VTGSNRGIGF EIARQLAVHG LTVVLTARNV NAGLEAVKSL RHQEEGLKVY FHQLDVTDSS
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF
Arabidopsis Description
At5g61830 [Source:UniProtKB/TrEMBL;Acc:Q501A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.