Factsheet for Solyc12g042370.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037433	Potato	cytosol	97.14	97.14
Solyc03g118100.2.1	Tomato	cytoskeleton, cytosol, nucleus	79.37	79.87
Solyc06g068740.2.1	Tomato	cytosol	79.37	79.87
Bra022746.1-P	Field mustard	cytosol	67.94	69.03
CDY45793	Canola	cytosol	67.94	69.03
CDX84895	Canola	cytosol	67.94	69.03
KRH00830	Soybean	cytosol	26.35	68.59
AT5G51030.1	Thale cress	cytosol	67.94	68.15
KRH41047	Soybean	cytosol	67.62	67.83
KRH59720	Soybean	cytosol	67.62	67.83
KRH38194	Soybean	cytosol	67.3	67.73
VIT_00s0283g00070.t01	Wine grape	cytosol	66.98	67.41
KRH63893	Soybean	cytosol	66.98	67.2
KRH54068	Soybean	cytosol	66.03	61.9
KRG94236	Soybean	plastid	60.32	61.69
GSMUA_Achr4P15900_001	Banana	cytosol	61.59	61.39
EES04148	Sorghum	cytosol	60.32	58.64
Zm00001d042250_P001	Maize	cytosol	59.68	58.02
TraesCS3D01G436600.1	Wheat	cytosol	58.41	57.14
HORVU3Hr1G096690.3	Barley	cytosol	58.41	57.14
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	58.1	57.01
Os01t0929500-01	Rice	cytosol	59.05	56.36
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	57.46	56.21
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	41.27	43.77
Solyc01g094220.2.1	Tomato	cytosol	39.37	41.33
Solyc11g071460.1.1	Tomato	cytosol	38.73	40.8
Solyc10g017570.2.1	Tomato	cytosol	39.37	40.0
Solyc01g094250.2.1	Tomato	cytosol	39.05	38.56
Solyc01g094260.2.1	Tomato	cytosol	39.05	38.56
Solyc01g094270.2.1	Tomato	cytosol, plastid	38.1	38.1
Solyc01g094240.2.1	Tomato	cytosol	37.78	37.42
Solyc01g099560.2.1	Tomato	cytosol	20.32	36.16
Solyc01g094210.2.1	Tomato	cytosol	33.97	36.03
Solyc11g042710.1.1	Tomato	cytosol	17.14	34.18

Protein Annotations

EnsemblPlants:Solyc12g042370.1.1	EnsemblPlantsGene:Solyc12g042370.1	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490
PANTHER:PTHR43490:SF54	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
UniParc:UPI000276A9AE	UniProt:K4DF30	MapMan:50.1.1	:	:	:

Description

No Description!

Coordinates

chr12:+:40334252..40336916

Molecular Weight (calculated)

35253.9 Da

IEP (calculated)

6.321

GRAVY (calculated)

-0.317

Length

315 amino acids

Sequence
(BLAST)

001: MDTCKKEKSK EKREKRSQEI SLLRTIPYSE HRKWWSSETV AVVTGANRGI GFEIAHQLAS HGLTVVLTSR ETGVGEEAVK VMQEGGLNVA FHQLDIVDHA
101: SIEAFSDWIK ETYGGLDILI NNAGVSFNVG TENSMENADT VIETNYIGTK NMTKAMIPLM RSSPYGARIV SVTSRLGRLH GKKNRITNAS LRQQLEDVDS
201: LTEEVIDNVM KIFLEQVKDG TWESGGWPQV FTDYSVSKVA VNAYTRLMAR ILEDRPEGHK IYINCYCPGW VKTAMTGWAG HISPEDAADT AVWLALLPDQ
301: FVSGKFFTER REISF

Best Arabidopsis Sequence Match ( AT5G51030.1 )
(BLAST)

001: MVGSKEKSKE KRDKRLQEIS LLRTIPYSDH QRWWTSETVA VVTGANRGIG FEMVRQLAGH GLTVILTSRD ENVGVEAAKI LQEGGFNVDF HRLDILDSSS
101: IQEFCEWIKE KYGFIDVLIN NAGVNYNVGS DNSVEFSHMV ISTNYYGTKN IINAMIPLMR HACQGARIVN VTSRLGRLKG RHSKLENEDV RAKLMDVDSL
201: TEEIVDKTVS EFLKQVEEGT WESGGWPHSF TDYSVSKMAV NAYTRVLAKE LSERPEGEKI YANCFCPGWV KTAMTGYAGN VSAEDGADTG VWLALLPDQA
301: ITGKFFAERR EISF

Arabidopsis Description

At5g51030 [Source:UniProtKB/TrEMBL;Acc:Q9FI45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.