Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH41047 | Soybean | cytosol | 70.93 | 70.7 |
| KRH59720 | Soybean | cytosol | 70.61 | 70.38 |
| Solyc06g068740.2.1 | Tomato | cytosol | 69.97 | 69.97 |
| Solyc03g118100.2.1 | Tomato | cytoskeleton, cytosol, nucleus | 69.97 | 69.97 |
| KRH38194 | Soybean | cytosol | 69.97 | 69.97 |
| PGSC0003DMT400036929 | Potato | cytoskeleton, cytosol, nucleus | 69.33 | 69.33 |
| AT5G51030.1 | Thale cress | cytosol | 69.01 | 68.79 |
| PGSC0003DMT400065718 | Potato | cytosol, mitochondrion | 60.38 | 68.48 |
| Bra022746.1-P | Field mustard | cytosol | 67.73 | 68.39 |
| CDX84895 | Canola | cytosol | 67.73 | 68.39 |
| CDY45793 | Canola | cytosol | 67.73 | 68.39 |
| KRH63893 | Soybean | cytosol | 68.37 | 68.15 |
| Solyc12g042370.1.1 | Tomato | cytosol | 67.41 | 66.98 |
| PGSC0003DMT400037433 | Potato | cytosol | 67.41 | 66.98 |
| KRH00830 | Soybean | cytosol | 25.88 | 66.94 |
| GSMUA_Achr4P15900_001 | Banana | cytosol | 66.13 | 65.51 |
| KRH54068 | Soybean | cytosol | 69.65 | 64.88 |
| KRG94236 | Soybean | plastid | 61.66 | 62.66 |
| TraesCS3D01G436600.1 | Wheat | cytosol | 63.9 | 62.11 |
| HORVU3Hr1G096690.3 | Barley | cytosol | 63.26 | 61.49 |
| TraesCS3B01G477700.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 62.62 | 61.06 |
| TraesCS3A01G444300.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 62.62 | 60.87 |
| Zm00001d042250_P001 | Maize | cytosol | 62.94 | 60.8 |
| EES04148 | Sorghum | cytosol | 62.62 | 60.49 |
| Os01t0929500-01 | Rice | cytosol | 62.62 | 59.39 |
| VIT_05s0094g00770.t01 | Wine grape | cytosol | 41.85 | 44.11 |
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 39.94 | 41.12 |
| VIT_06s0061g00670.t01 | Wine grape | plastid | 39.94 | 41.12 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 38.66 | 40.6 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 38.02 | 40.07 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 38.02 | 40.07 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 38.02 | 39.93 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 38.02 | 39.93 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 37.7 | 39.73 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 22.68 | 35.68 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 26.2 | 32.54 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 18.85 | 17.25 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 40.58 | 17.09 |
Protein Annotations
| EntrezGene:100254495 | wikigene:100254495 | Gene3D:3.40.50.720 | MapMan:50.1.1 | UniProt:A5C199 | EMBL:AM478546 |
| ProteinID:CAN79560 | ProteinID:CAN79560.1 | ProteinID:CBI35626 | ProteinID:CBI35626.3 | EMBL:FN596273 | EntrezGene:LOC100254495 |
| wikigene:LOC100254495 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF54 | InterPro:SDR_fam | SUPFAM:SSF51735 | UniParc:UPI0001524DAD | ArrayExpress:VIT_00s0283g00070 | EnsemblPlantsGene:VIT_00s0283g00070 |
| EnsemblPlants:VIT_00s0283g00070.t01 | unigene:Vvi.22779 | RefSeq:XP_002277858 | RefSeq:XP_002277858.1 | SEG:seg | : |
Description
No Description!
Coordinates
chrUn:-:21235000..21237417
Molecular Weight (calculated)
34855.2 Da
IEP (calculated)
5.738
GRAVY (calculated)
-0.327
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRKERAEER RKQRQQEISL FRTIPYSDHQ RWWNSETIAV VTGANRGIGF EIARQLCGHG LTVILTSRDS AIGREAASVL QEGGFNAVSH QLDVLDPSSI
101: EQFAEWVQQN YGFVDILINN AGVNYNMGSE NSVENAENVI ATNYFGTKNV IKAMVPLMKP SASGARIVNV SSRLGRINGR RNKIEDSALR GQLEDVDSLS
201: EEVIDQMVHT FVEQVKDGTW TSAGWPQTFT DYSVSKLAVN CYTRIMAKVL SDRPEGEKIF INCYCPGWVK TAMTGWAGNV SVEEGADTGV WLALLPDQSV
301: TGKIFAERRE VHF
101: EQFAEWVQQN YGFVDILINN AGVNYNMGSE NSVENAENVI ATNYFGTKNV IKAMVPLMKP SASGARIVNV SSRLGRINGR RNKIEDSALR GQLEDVDSLS
201: EEVIDQMVHT FVEQVKDGTW TSAGWPQTFT DYSVSKLAVN CYTRIMAKVL SDRPEGEKIF INCYCPGWVK TAMTGWAGNV SVEEGADTGV WLALLPDQSV
301: TGKIFAERRE VHF
001: MVGSKEKSKE KRDKRLQEIS LLRTIPYSDH QRWWTSETVA VVTGANRGIG FEMVRQLAGH GLTVILTSRD ENVGVEAAKI LQEGGFNVDF HRLDILDSSS
101: IQEFCEWIKE KYGFIDVLIN NAGVNYNVGS DNSVEFSHMV ISTNYYGTKN IINAMIPLMR HACQGARIVN VTSRLGRLKG RHSKLENEDV RAKLMDVDSL
201: TEEIVDKTVS EFLKQVEEGT WESGGWPHSF TDYSVSKMAV NAYTRVLAKE LSERPEGEKI YANCFCPGWV KTAMTGYAGN VSAEDGADTG VWLALLPDQA
301: ITGKFFAERR EISF
101: IQEFCEWIKE KYGFIDVLIN NAGVNYNVGS DNSVEFSHMV ISTNYYGTKN IINAMIPLMR HACQGARIVN VTSRLGRLKG RHSKLENEDV RAKLMDVDSL
201: TEEIVDKTVS EFLKQVEEGT WESGGWPHSF TDYSVSKMAV NAYTRVLAKE LSERPEGEKI YANCFCPGWV KTAMTGYAGN VSAEDGADTG VWLALLPDQA
301: ITGKFFAERR EISF
Arabidopsis Description
At5g51030 [Source:UniProtKB/TrEMBL;Acc:Q9FI45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.