Factsheet for Solyc03g118100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036929	Potato	cytoskeleton, cytosol, nucleus	97.76	97.76
Solyc06g068740.2.1	Tomato	cytosol	79.55	79.55
Solyc12g042370.1.1	Tomato	cytosol	79.87	79.37
KRH00830	Soybean	cytosol	27.48	71.07
KRH59720	Soybean	cytosol	70.29	70.06
VIT_00s0283g00070.t01	Wine grape	cytosol	69.97	69.97
KRH63893	Soybean	cytosol	69.97	69.75
KRH41047	Soybean	cytosol	69.65	69.43
KRH38194	Soybean	cytosol	68.69	68.69
AT5G51030.1	Thale cress	cytosol	68.37	68.15
CDY45793	Canola	cytosol	67.09	67.74
CDX84895	Canola	cytosol	67.09	67.74
Bra022746.1-P	Field mustard	cytosol	67.09	67.74
KRH54068	Soybean	cytosol	69.01	64.29
GSMUA_Achr4P15900_001	Banana	cytosol	62.3	61.71
KRG94236	Soybean	plastid	60.06	61.04
Zm00001d042250_P001	Maize	cytosol	59.11	57.1
HORVU3Hr1G096690.3	Barley	cytosol	58.47	56.83
TraesCS3D01G436600.1	Wheat	cytosol	58.47	56.83
EES04148	Sorghum	cytosol	58.79	56.79
Os01t0929500-01	Rice	cytosol	59.74	56.67
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	57.83	56.39
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	57.83	56.21
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	39.3	41.41
Solyc11g071460.1.1	Tomato	cytosol	37.38	39.13
Solyc01g094210.2.1	Tomato	cytosol	36.74	38.72
Solyc10g017570.2.1	Tomato	cytosol	38.34	38.71
Solyc01g094220.2.1	Tomato	cytosol	37.06	38.67
Solyc01g094270.2.1	Tomato	cytosol, plastid	37.7	37.46
Solyc01g099560.2.1	Tomato	cytosol	21.09	37.29
Solyc01g094240.2.1	Tomato	cytosol	37.38	36.79
Solyc01g094260.2.1	Tomato	cytosol	37.38	36.68
Solyc01g094250.2.1	Tomato	cytosol	37.06	36.36
Solyc11g042710.1.1	Tomato	cytosol	17.25	34.18

Protein Annotations

EnsemblPlants:Solyc03g118100.2.1	EnsemblPlantsGene:Solyc03g118100.2	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	ncoils:Coil
PANTHER:PTHR43490	PANTHER:PTHR43490:SF54	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002767A58	UniProt:K4BLW1	MapMan:50.1.1	:	:

Description

No Description!

Coordinates

chr3:-:67072348..67074838

Molecular Weight (calculated)

35255.0 Da

IEP (calculated)

6.409

GRAVY (calculated)

-0.267

Length

313 amino acids

Sequence
(BLAST)

001: MDKKERAKEK KEKRRQEISL LRTIPYSDHQ RWWSSETIAV VTGANRGIGF EIAHQLASHG VTVVLTSRET AVGEEAVKVF QEGGLNVAFH QLDIVDPVSI
101: QTFCDWIKET YGGLDILINN AGVNFNCGKD NSVEFSEMVI QVNYFGTKNM IKALTPLMRP SPAGSRIVSV TSRLGRLNSK RNGISNVAVR EQLENVDTLS
201: EEVIDKTMHT FLEQVKDGTW ESAGWPHVFT DYSLSKLAVN AYTRLMARIF EERPEGEKIY INCYCPGWVK TAMTGWAGHV TIEEAADTAV WLALLPDQFV
301: SGKFFAERRE INF

Best Arabidopsis Sequence Match ( AT5G51030.1 )
(BLAST)

001: MVGSKEKSKE KRDKRLQEIS LLRTIPYSDH QRWWTSETVA VVTGANRGIG FEMVRQLAGH GLTVILTSRD ENVGVEAAKI LQEGGFNVDF HRLDILDSSS
101: IQEFCEWIKE KYGFIDVLIN NAGVNYNVGS DNSVEFSHMV ISTNYYGTKN IINAMIPLMR HACQGARIVN VTSRLGRLKG RHSKLENEDV RAKLMDVDSL
201: TEEIVDKTVS EFLKQVEEGT WESGGWPHSF TDYSVSKMAV NAYTRVLAKE LSERPEGEKI YANCFCPGWV KTAMTGYAGN VSAEDGADTG VWLALLPDQA
301: ITGKFFAERR EISF

Arabidopsis Description

At5g51030 [Source:UniProtKB/TrEMBL;Acc:Q9FI45]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.