Factsheet for Solyc01g094270.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	91.75	94.44
Solyc01g094260.2.1	Tomato	cytosol	79.05	78.06
Solyc01g094250.2.1	Tomato	cytosol	78.73	77.74
Solyc01g094240.2.1	Tomato	cytosol	78.41	77.67
Solyc01g099560.2.1	Tomato	cytosol	32.7	58.19
KRH40500	Soybean	cytosol, nucleus	52.7	56.46
Solyc01g094220.2.1	Tomato	cytosol	53.02	55.67
KRH65114	Soybean	cytosol	51.11	54.76
AT2G24190.2	Thale cress	cytosol	52.06	54.49
Solyc01g094210.2.1	Tomato	cytosol	51.11	54.21
CDY48937	Canola	cytosol	50.79	54.05
Bra007585.1-P	Field mustard	cytosol	50.79	54.05
CDX71758	Canola	cytosol	50.79	54.05
Solyc10g017570.2.1	Tomato	cytosol	53.02	53.87
Bra032567.1-P	Field mustard	cytosol	20.0	53.85
AT1G01800.1	Thale cress	cytosol	49.84	53.22
CDY15148	Canola	cytosol	48.57	51.86
Bra033230.1-P	Field mustard	cytosol	48.57	51.86
Bra014448.1-P	Field mustard	cytosol	48.89	51.85
CDX89104	Canola	cytosol	45.4	51.81
CDX90062	Canola	cytosol	48.25	51.53
OQU82017	Sorghum	extracellular	26.98	51.52
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	52.38	50.46
CDY56927	Canola	endoplasmic reticulum, golgi	48.25	49.67
Bra032573.1-P	Field mustard	cytosol	20.95	49.25
Solyc11g071460.1.1	Tomato	cytosol	45.4	47.83
TraesCS7A01G114100.1	Wheat	cytosol	46.03	47.23
TraesCS2B01G388700.1	Wheat	cytosol, plastid	45.71	47.06
TraesCS2D01G367800.1	Wheat	cytosol, plastid	45.71	47.06
Os04t0531900-01	Rice	cytosol, plastid	45.4	46.58
EES11171	Sorghum	cytosol	45.71	46.3
EES11175	Sorghum	cytosol, plastid	43.81	46.15
HORVU7Hr1G024270.5	Barley	cytosol	44.76	45.93
TraesCS2A01G371100.1	Wheat	cytosol	44.44	45.9
TraesCS2A01G370900.1	Wheat	cytosol	44.76	45.63
Os04t0532100-01	Rice	cytosol	44.76	45.63
TraesCS2D01G367200.1	Wheat	cytosol	44.76	45.63
Os04t0532400-01	Rice	cytosol	44.44	45.6
TraesCS2B01G388300.1	Wheat	cytosol	44.76	45.19
TraesCS2A01G371300.1	Wheat	cytosol	42.86	45.0
Os04t0531700-01	Rice	mitochondrion	15.56	44.95
EES11167	Sorghum	cytosol	44.13	44.84
EES11174	Sorghum	cytosol	44.13	44.84
TraesCS2B01G388200.2	Wheat	cytosol	38.41	44.81
TraesCS2A01G371000.1	Wheat	cytosol	43.81	44.81
TraesCS2B01G388600.1	Wheat	cytosol, plastid	43.49	44.77
EES11173	Sorghum	cytosol	43.81	44.37
TraesCS2B01G388100.1	Wheat	cytosol	43.81	43.81
TraesCS2A01G371400.1	Wheat	cytosol, plastid	42.54	43.79
TraesCS2D01G367700.1	Wheat	mitochondrion	42.86	43.69
EER93229	Sorghum	cytosol	43.49	43.63
HORVU2Hr1G091460.1	Barley	cytosol, mitochondrion, plastid	43.49	43.63
TraesCS2A01G371200.1	Wheat	cytosol	42.22	43.61
HORVU1Hr1G064390.1	Barley	cytosol	42.86	43.55
HORVU2Hr1G091430.7	Barley	cytosol	43.17	43.45
KXG26779	Sorghum	cytosol	42.86	43.41
EES07554	Sorghum	cytosol	42.22	43.18
TraesCS7A01G111500.1	Wheat	cytosol	30.16	42.79
HORVU5Hr1G031560.1	Barley	cytosol	17.14	42.52
TraesCS2A01G371500.1	Wheat	plastid	45.08	42.39
TraesCS2A01G099800.1	Wheat	cytosol	42.22	42.36
TraesCS2D01G517700.1	Wheat	cytosol	41.27	42.21
KXG31187	Sorghum	mitochondrion	39.68	42.09
EES07551	Sorghum	cytosol	40.32	41.91
TraesCS2B01G544800.1	Wheat	cytosol	40.95	41.88
EES07552	Sorghum	cytosol	40.95	41.88
TraesCS2A01G516200.2	Wheat	mitochondrion	40.32	41.78
KXG31133	Sorghum	cytosol	38.41	41.72
TraesCS2D01G367600.2	Wheat	plastid	41.59	41.72
TraesCS2D01G099300.1	Wheat	cytosol	41.59	41.72
EES07553	Sorghum	cytosol	40.63	41.42
EES17690	Sorghum	cytosol	21.9	41.32
EES09734	Sorghum	cytosol	40.63	41.16
TraesCS2B01G116700.1	Wheat	mitochondrion	40.95	41.08
HORVU2Hr1G091440.3	Barley	mitochondrion	46.03	40.73
TraesCS2D01G367400.1	Wheat	plastid	44.76	40.52
TraesCS1D01G415900.1	Wheat	cytosol	40.0	40.38
GSMUA_Achr5P12200_001	Banana	cytosol	40.0	40.0
EER97757	Sorghum	cytosol	41.9	39.88
HORVU1Hr1G089830.1	Barley	cytosol	39.05	39.42
TraesCS1B01G437500.1	Wheat	cytosol	38.73	39.1
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	19.37	38.36
Solyc12g042370.1.1	Tomato	cytosol	38.1	38.1
Solyc11g042710.1.1	Tomato	cytosol	19.05	37.97
Solyc03g118100.2.1	Tomato	cytoskeleton, cytosol, nucleus	37.46	37.7
Solyc06g068740.2.1	Tomato	cytosol	36.51	36.74
TraesCS1A01G408800.1	Wheat	cytosol	39.05	36.28
Os07t0685800-01	Rice	plastid	42.22	35.66
OQU85768	Sorghum	cytosol	40.32	35.38
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	33.33	35.35
HORVU2Hr1G114340.4	Barley	endoplasmic reticulum, golgi	40.95	35.34
HORVU2Hr1G017120.1	Barley	plastid	40.95	35.15
TraesCS2D01G099500.1	Wheat	plastid	41.27	34.57
KXG36979	Sorghum	plastid	40.95	34.49
TraesCS2A01G100000.2	Wheat	plastid	40.63	34.04
TraesCS2B01G117000.1	Wheat	plastid	40.63	33.95
HORVU5Hr1G031520.2	Barley	cytosol	28.57	32.14
Os02t0640600-00	Rice	mitochondrion	33.33	28.23
GSMUA_Achr5P12210_001	Banana	mitochondrion	40.0	20.52
Os04t0531750-00	Rice	mitochondrion	2.86	2.72

Protein Annotations

EnsemblPlants:Solyc01g094270.2.1	EnsemblPlantsGene:Solyc01g094270.2	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490
PANTHER:PTHR43490:SF58	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SUPFAM:SSF51735
UniParc:UPI00027687B4	UniProt:K4AZG8	MapMan:50.1.1	:	:	:

Description

No Description!

Coordinates

chr1:+:85810539..85813762

Molecular Weight (calculated)

34820.6 Da

IEP (calculated)

5.123

GRAVY (calculated)

-0.161

Length

315 amino acids

Sequence
(BLAST)

001: MAEKITSVDS IRYAVVSGGN KGLGYETCKQ LASKGVVVVL TSRDEKRGIE AIERLKKESN FTNDQVLFHQ LDIMDPASIS SLVDFINTKF GRLDILINNA
101: GIGGLMVEGD VLVLKEIIEG DLFTVSTENG EDGGTMKSYP EITTNYELTK QCVETNYYGA KRTIEAFAPL LQLSNSPRIV NVASFLGKLK LLRNEWAKKV
201: LSDAKSLTED KVEQVLNEFL KDFTENAIES KGWPTNFTAY RVSKAALIAY TRILATKYPN FRVNSVCPGY CKTDVNANTG NLTAEEGAES FVKLALLPND
301: GPSGLFFYRQ EVTLF

Best Arabidopsis Sequence Match ( AT2G24190.2 )
(BLAST)

001: MAEESPSSGL CRYAIVTGGN RGIGFEICRQ LANKGIRVIL TSRDEKQGLE AVETLKKELE ISDQSIVFHQ LDVSDPVSVT SLAEFVKTHF GKLDILINNA
101: GVGGVITDVD ALRAGTGKEG FKWEETITET YELAEECIKI NYYGPKRMCE AFIPLLQLSD SPRIINVSSF MGQVKNLVNE WAKGILSDAE NLTEVRIDQV
201: INQLLNDLKE DTAKTKYWAK VMSAYVVSKA GLNAYTRILA KKHPEIRVNS VCPGFVKTDM NFKTGILSVE EGASSPVRLA LLPHQESPSG CFFDRKQVSE
301: F

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G24190]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.