Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G388600.1 | Wheat | cytosol, plastid | 91.5 | 91.5 |
| TraesCS2D01G367700.1 | Wheat | mitochondrion | 88.56 | 87.7 |
| TraesCS2A01G371200.1 | Wheat | cytosol | 87.25 | 87.54 |
| TraesCS7A01G114100.1 | Wheat | cytosol | 72.88 | 72.64 |
| TraesCS2A01G371100.1 | Wheat | cytosol | 71.9 | 72.13 |
| Os04t0531900-01 | Rice | cytosol, plastid | 69.28 | 69.06 |
| TraesCS7A01G111500.1 | Wheat | cytosol | 50.0 | 68.92 |
| Os04t0532400-01 | Rice | cytosol | 68.95 | 68.73 |
| TraesCS2A01G371000.1 | Wheat | cytosol | 64.38 | 63.96 |
| KRH40499 | Soybean | cytosol | 19.93 | 55.45 |
| TraesCS2A01G516200.2 | Wheat | mitochondrion | 54.25 | 54.61 |
| TraesCS2A01G371300.1 | Wheat | cytosol | 52.94 | 54.0 |
| TraesCS2A01G370900.1 | Wheat | cytosol | 53.59 | 53.07 |
| Bra032567.1-P | Field mustard | cytosol | 20.26 | 52.99 |
| TraesCS2A01G371500.1 | Wheat | plastid | 57.52 | 52.54 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 50.33 | 51.85 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 50.33 | 51.85 |
| KRH40500 | Soybean | cytosol, nucleus | 49.67 | 51.7 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 50.0 | 51.34 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 49.67 | 51.01 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 49.02 | 50.51 |
| KRH00696 | Soybean | mitochondrion | 48.37 | 50.34 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 48.69 | 50.0 |
| KRH48196 | Soybean | cytosol | 48.37 | 50.0 |
| PGSC0003DMT400000067 | Potato | golgi, peroxisome | 47.06 | 49.48 |
| VIT_06s0061g00670.t01 | Wine grape | plastid | 49.02 | 49.34 |
| Bra032573.1-P | Field mustard | cytosol | 21.57 | 49.25 |
| KRH00691 | Soybean | cytosol | 40.85 | 49.02 |
| Solyc01g094210.2.1 | Tomato | cytosol | 47.06 | 48.48 |
| Solyc01g099560.2.1 | Tomato | cytosol | 27.78 | 48.02 |
| PGSC0003DMT400048179 | Potato | cytosol | 46.73 | 47.83 |
| PGSC0003DMT400048181 | Potato | cytosol | 46.73 | 47.83 |
| Solyc11g071460.1.1 | Tomato | cytosol | 46.73 | 47.83 |
| KRH48198 | Soybean | cytosol | 45.1 | 47.75 |
| KRH65113 | Soybean | cytosol | 46.41 | 47.49 |
| KRH48194 | Soybean | cytosol | 46.08 | 47.32 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 30.72 | 47.24 |
| KRH48202 | Soybean | cytosol | 46.08 | 47.16 |
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 46.73 | 47.04 |
| Bra007585.1-P | Field mustard | cytosol | 45.42 | 46.96 |
| CDY48937 | Canola | cytosol | 45.42 | 46.96 |
| KRH65114 | Soybean | cytosol | 45.1 | 46.94 |
| PGSC0003DMT400000078 | Potato | cytosol | 45.75 | 46.67 |
| Solyc01g094220.2.1 | Tomato | cytosol | 45.75 | 46.67 |
| CDX71758 | Canola | cytosol | 45.1 | 46.62 |
| KRH48206 | Soybean | cytosol | 46.08 | 46.23 |
| Bra014448.1-P | Field mustard | cytosol | 44.77 | 46.13 |
| TraesCS1A01G408800.1 | Wheat | cytosol | 50.98 | 46.02 |
| KRH17659 | Soybean | cytosol | 14.71 | 45.92 |
| PGSC0003DMT400047834 | Potato | cytosol | 44.77 | 45.82 |
| CDX89104 | Canola | cytosol | 41.18 | 45.65 |
| TraesCS2A01G099800.1 | Wheat | cytosol | 46.73 | 45.54 |
| PGSC0003DMT400088659 | Potato | cytosol | 17.32 | 44.92 |
| AT2G24190.2 | Thale cress | cytosol | 44.12 | 44.85 |
| CDY56927 | Canola | endoplasmic reticulum, golgi | 44.12 | 44.12 |
| AT1G01800.1 | Thale cress | cytosol | 41.83 | 43.39 |
| PGSC0003DMT400048175 | Potato | cytosol, peroxisome, plastid | 17.97 | 43.31 |
| PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 43.14 | 43.14 |
| KRH65115 | Soybean | cytosol | 45.75 | 43.08 |
| Solyc01g094270.2.1 | Tomato | cytosol, plastid | 43.79 | 42.54 |
| AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 45.42 | 42.51 |
| Solyc01g094240.2.1 | Tomato | cytosol | 44.12 | 42.45 |
| Bra033230.1-P | Field mustard | cytosol | 40.52 | 42.03 |
| CDY15148 | Canola | cytosol | 40.2 | 41.69 |
| CDX90062 | Canola | cytosol | 40.2 | 41.69 |
| Solyc01g094260.2.1 | Tomato | cytosol | 43.46 | 41.69 |
| PGSC0003DMT400026580 | Potato | cytosol | 42.16 | 41.61 |
| Solyc10g017570.2.1 | Tomato | cytosol | 41.83 | 41.29 |
| Solyc01g094250.2.1 | Tomato | cytosol | 42.81 | 41.07 |
| TraesCS6A01G218000.1 | Wheat | peroxisome | 38.56 | 40.41 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 33.01 | 40.08 |
| TraesCS2A01G353500.1 | Wheat | peroxisome | 37.91 | 39.73 |
| TraesCS2A01G100000.2 | Wheat | plastid | 45.42 | 36.97 |
| KRH40504 | Soybean | endoplasmic reticulum | 46.41 | 36.41 |
| Solyc11g042710.1.1 | Tomato | cytosol | 18.63 | 36.08 |
| TraesCS3A01G444300.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 34.64 | 32.92 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 24.18 | 21.64 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 49.02 | 20.19 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G371400.1 | EnsemblPlantsGene:TraesCS2A01G371400 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF19 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SUPFAM:SSF51735 | MapMan:50.1.1 |
Description
No Description!
Coordinates
chr2A:-:613874612..613877035
Molecular Weight (calculated)
33139.5 Da
IEP (calculated)
5.423
GRAVY (calculated)
-0.158
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGAILPNLP NTRVAVVTGG NKGIGFEVCR QLASGGISVV LTARDEMRGG EAVERLNALG LSHVVFHQLE ITDASSAAAL AGFLKTRFGK LDILVNNAAV
101: GGVEYGQEFD TNEEKFSGLD FHERVEWMLK NAREPIDSAK NSVKTNYYGT KHVIEALLPL LQASSEGRIV NVSSNYGLLR HIGSEEVRQE LNDVDNLTEG
201: RLDDLLEKFI KDFKAGELEM HGWSTKFSAY KVAKAAMNAY SRILAQGRPE LHVNCAHPGF VKTDMSMGSG VLTPEEGARN LVKVALLPDG GPTGAYFAMG
301: EEAPFV
101: GGVEYGQEFD TNEEKFSGLD FHERVEWMLK NAREPIDSAK NSVKTNYYGT KHVIEALLPL LQASSEGRIV NVSSNYGLLR HIGSEEVRQE LNDVDNLTEG
201: RLDDLLEKFI KDFKAGELEM HGWSTKFSAY KVAKAAMNAY SRILAQGRPE LHVNCAHPGF VKTDMSMGSG VLTPEEGARN LVKVALLPDG GPTGAYFAMG
301: EEAPFV
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.