Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G388200.2 | Wheat | cytosol | 75.08 | 84.81 |
| HORVU2Hr1G091430.7 | Barley | cytosol | 86.56 | 84.34 |
| TraesCS7A01G114100.1 | Wheat | cytosol | 77.7 | 77.2 |
| TraesCS2A01G371200.1 | Wheat | cytosol | 72.13 | 72.13 |
| TraesCS2A01G371400.1 | Wheat | cytosol, plastid | 72.13 | 71.9 |
| TraesCS7A01G111500.1 | Wheat | cytosol | 51.48 | 70.72 |
| Os04t0532400-01 | Rice | cytosol | 70.49 | 70.03 |
| Os04t0531900-01 | Rice | cytosol, plastid | 69.51 | 69.06 |
| TraesCS2A01G371000.1 | Wheat | cytosol | 68.2 | 67.53 |
| HORVU5Hr1G031520.2 | Barley | cytosol | 55.41 | 60.36 |
| KRH40499 | Soybean | cytosol | 20.66 | 57.27 |
| TraesCS2A01G371300.1 | Wheat | cytosol | 54.75 | 55.67 |
| TraesCS2A01G516200.2 | Wheat | mitochondrion | 54.75 | 54.93 |
| TraesCS2A01G371500.1 | Wheat | plastid | 58.36 | 53.13 |
| KRH48198 | Soybean | cytosol | 49.84 | 52.6 |
| Bra032567.1-P | Field mustard | cytosol | 20.0 | 52.14 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 50.49 | 51.85 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 50.49 | 51.85 |
| TraesCS2A01G370900.1 | Wheat | cytosol | 52.46 | 51.78 |
| PGSC0003DMT400000067 | Potato | golgi, peroxisome | 48.85 | 51.2 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 49.84 | 51.01 |
| Solyc01g094220.2.1 | Tomato | cytosol | 50.16 | 51.0 |
| PGSC0003DMT400000078 | Potato | cytosol | 50.16 | 51.0 |
| VIT_06s0061g00670.t01 | Wine grape | plastid | 50.82 | 50.99 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 49.51 | 50.67 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 49.18 | 50.51 |
| KRH00696 | Soybean | mitochondrion | 48.52 | 50.34 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 48.85 | 50.0 |
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 49.84 | 50.0 |
| KRH00691 | Soybean | cytosol | 41.64 | 49.8 |
| Solyc01g094210.2.1 | Tomato | cytosol | 48.2 | 49.49 |
| KRH48196 | Soybean | cytosol | 47.87 | 49.32 |
| KRH40500 | Soybean | cytosol, nucleus | 47.54 | 49.32 |
| KRH65113 | Soybean | cytosol | 47.87 | 48.83 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 31.8 | 48.74 |
| Bra032573.1-P | Field mustard | cytosol | 21.31 | 48.51 |
| Solyc11g071460.1.1 | Tomato | cytosol | 47.21 | 48.16 |
| PGSC0003DMT400048181 | Potato | cytosol | 47.21 | 48.16 |
| PGSC0003DMT400048179 | Potato | cytosol | 47.21 | 48.16 |
| PGSC0003DMT400047834 | Potato | cytosol | 47.21 | 48.16 |
| KRH48202 | Soybean | cytosol | 47.21 | 48.16 |
| TraesCS1A01G408800.1 | Wheat | cytosol | 53.44 | 48.08 |
| KRH48194 | Soybean | cytosol | 46.89 | 47.99 |
| KRH48206 | Soybean | cytosol | 47.54 | 47.54 |
| PGSC0003DMT400088659 | Potato | cytosol | 18.36 | 47.46 |
| Solyc01g099560.2.1 | Tomato | cytosol | 27.54 | 47.46 |
| KRH17659 | Soybean | cytosol | 15.08 | 46.94 |
| KRH65114 | Soybean | cytosol | 45.25 | 46.94 |
| CDY48937 | Canola | cytosol | 45.25 | 46.62 |
| Bra007585.1-P | Field mustard | cytosol | 45.25 | 46.62 |
| TraesCS2A01G099800.1 | Wheat | cytosol | 47.87 | 46.5 |
| KRH65115 | Soybean | cytosol | 49.51 | 46.46 |
| CDX71758 | Canola | cytosol | 44.92 | 46.28 |
| Bra014448.1-P | Field mustard | cytosol | 44.92 | 46.13 |
| AT1G01800.1 | Thale cress | cytosol | 44.59 | 46.1 |
| CDX89104 | Canola | cytosol | 41.31 | 45.65 |
| CDY56927 | Canola | endoplasmic reticulum, golgi | 45.25 | 45.1 |
| Solyc01g094240.2.1 | Tomato | cytosol | 46.89 | 44.97 |
| Solyc01g094270.2.1 | Tomato | cytosol, plastid | 45.9 | 44.44 |
| PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 44.26 | 44.12 |
| Solyc01g094260.2.1 | Tomato | cytosol | 45.9 | 43.89 |
| PGSC0003DMT400026580 | Potato | cytosol | 44.59 | 43.87 |
| AT2G24190.2 | Thale cress | cytosol | 43.28 | 43.85 |
| Bra033230.1-P | Field mustard | cytosol | 42.3 | 43.73 |
| CDX90062 | Canola | cytosol | 42.3 | 43.73 |
| Solyc10g017570.2.1 | Tomato | cytosol | 44.26 | 43.55 |
| CDY15148 | Canola | cytosol | 41.97 | 43.39 |
| PGSC0003DMT400048175 | Potato | cytosol, peroxisome, plastid | 18.03 | 43.31 |
| Solyc01g094250.2.1 | Tomato | cytosol | 45.25 | 43.26 |
| AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 45.57 | 42.51 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 33.44 | 40.48 |
| TraesCS2A01G100000.2 | Wheat | plastid | 49.18 | 39.89 |
| TraesCS6A01G218000.1 | Wheat | peroxisome | 37.7 | 39.38 |
| TraesCS2A01G353500.1 | Wheat | peroxisome | 37.7 | 39.38 |
| KRH40504 | Soybean | endoplasmic reticulum | 48.85 | 38.21 |
| Solyc11g042710.1.1 | Tomato | cytosol | 19.34 | 37.34 |
| TraesCS3A01G444300.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 35.41 | 33.54 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 25.25 | 22.51 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 49.84 | 20.46 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G371100.1 | EnsemblPlantsGene:TraesCS2A01G371100 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF19 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| MapMan:50.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:-:613688638..613690027
Molecular Weight (calculated)
33350.9 Da
IEP (calculated)
5.264
GRAVY (calculated)
-0.118
Length
305 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGAISSGPN PRIAVVTGGN KGIGFEVCRQ LASHGVAVVL TARDEPRGAE AVEKLRALGL AQVIFHQLDV TDTSSIATLF VFLKTRFGKL DILVNNAAIG
101: GVEYLQELHA NEEKFAGMDF DQMLEWMVKN VREPVDSAKK GVQTNYYGTK HVTEAVLPLL QSSSEGRIVN VSSLFGLLRL ISNEEVRQEL NDIDNLTEER
201: LDELLDRFLR DFEADALEAR GWPMGCSAYK VAKAAMNAYS RLLSRRHPAL RVNCVHPGYV KTGITMNSGV LTPEEGARNV VKVALAPEGG PTGKFFAEDE
301: EASFV
101: GVEYLQELHA NEEKFAGMDF DQMLEWMVKN VREPVDSAKK GVQTNYYGTK HVTEAVLPLL QSSSEGRIVN VSSLFGLLRL ISNEEVRQEL NDIDNLTEER
201: LDELLDRFLR DFEADALEAR GWPMGCSAYK VAKAAMNAYS RLLSRRHPAL RVNCVHPGYV KTGITMNSGV LTPEEGARNV VKVALAPEGG PTGKFFAEDE
301: EASFV
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.