Factsheet for VIT_06s0009g01450.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g071460.1.1	Tomato	cytosol	65.08	54.85
PGSC0003DMT400048181	Potato	cytosol	64.29	54.18
OQU82017	Sorghum	extracellular	35.32	53.94
PGSC0003DMT400048179	Potato	cytosol	63.89	53.85
VIT_02s0025g04510.t01	Wine grape	cytosol	38.89	49.25
PGSC0003DMT400047834	Potato	cytosol	57.54	48.49
TraesCS2B01G116700.1	Wheat	mitochondrion	54.37	43.63
TraesCS2D01G099300.1	Wheat	cytosol	52.78	42.36
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	26.59	42.14
TraesCS2A01G099800.1	Wheat	cytosol	52.38	42.04
EER97757	Sorghum	cytosol	55.16	41.99
EES17690	Sorghum	cytosol	26.98	40.72
Os07t0685800-01	Rice	plastid	57.54	38.87
VIT_15s0046g03650.t01	Wine grape	cytosol	45.24	38.26
HORVU2Hr1G017120.1	Barley	plastid	55.16	37.87
TraesCS2D01G099500.1	Wheat	plastid	56.35	37.77
TraesCS2A01G100000.2	Wheat	plastid	55.95	37.5
TraesCS2B01G117000.1	Wheat	plastid	55.56	37.14
VIT_15s0046g03570.t01	Wine grape	plastid	43.65	37.04
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	42.86	36.36
TraesCS2D01G517700.1	Wheat	cytosol	44.44	36.36
VIT_15s0046g03550.t01	Wine grape	cytosol	42.86	36.24
TraesCS2A01G516200.2	Wheat	mitochondrion	43.65	36.18
TraesCS2B01G544800.1	Wheat	cytosol	43.65	35.71
EES07552	Sorghum	cytosol	43.65	35.71
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	42.06	35.69
VIT_15s0046g03600.t01	Wine grape	cytosol	42.06	35.57
Solyc11g042710.1.1	Tomato	cytosol	22.22	35.44
KXG36979	Sorghum	plastid	52.38	35.29
VIT_06s0061g00670.t01	Wine grape	plastid	42.46	35.2
TraesCS2D01G367800.1	Wheat	cytosol, plastid	42.46	34.97
TraesCS2B01G388700.1	Wheat	cytosol, plastid	42.46	34.97
EES07551	Sorghum	cytosol	41.27	34.32
TraesCS7A01G114100.1	Wheat	cytosol	41.67	34.2
EES11167	Sorghum	cytosol	42.06	34.19
KXG31133	Sorghum	cytosol	38.89	33.79
VIT_06s0061g00640.t01	Wine grape	cytosol	40.48	33.55
TraesCS2A01G371100.1	Wheat	cytosol	40.48	33.44
EES07554	Sorghum	cytosol	40.87	33.44
HORVU2Hr1G091430.7	Barley	cytosol	41.27	33.23
EES11174	Sorghum	cytosol	40.87	33.23
TraesCS2A01G371000.1	Wheat	cytosol	40.48	33.12
TraesCS2B01G388300.1	Wheat	cytosol	40.87	33.01
TraesCS1D01G415900.1	Wheat	cytosol	40.87	33.01
TraesCS2B01G388600.1	Wheat	cytosol, plastid	40.08	33.01
TraesCS2A01G371400.1	Wheat	cytosol, plastid	40.08	33.01
EES11175	Sorghum	cytosol, plastid	38.89	32.78
HORVU1Hr1G089830.1	Barley	cytosol	40.48	32.69
HORVU7Hr1G024270.5	Barley	cytosol	39.68	32.57
KXG26779	Sorghum	cytosol	40.08	32.48
TraesCS1B01G437500.1	Wheat	cytosol	40.08	32.37
EES07553	Sorghum	cytosol	39.68	32.36
Os04t0531900-01	Rice	cytosol, plastid	39.29	32.25
TraesCS2A01G371500.1	Wheat	plastid	42.46	31.94
HORVU1Hr1G064390.1	Barley	cytosol	39.29	31.94
TraesCS2A01G371300.1	Wheat	cytosol	37.7	31.67
EES11171	Sorghum	cytosol	38.89	31.51
TraesCS2A01G371200.1	Wheat	cytosol	38.1	31.48
Os04t0532400-01	Rice	cytosol	38.1	31.27
TraesCS2A01G370900.1	Wheat	cytosol	38.1	31.07
TraesCS2D01G367700.1	Wheat	mitochondrion	38.1	31.07
Os04t0532100-01	Rice	cytosol	38.1	31.07
EER93229	Sorghum	cytosol	38.49	30.89
HORVU2Hr1G091460.1	Barley	cytosol, mitochondrion, plastid	38.49	30.89
TraesCS2D01G367400.1	Wheat	plastid	42.46	30.75
EES09734	Sorghum	cytosol	37.7	30.55
TraesCS2D01G367200.1	Wheat	cytosol	37.3	30.42
EES11173	Sorghum	cytosol	37.3	30.23
TraesCS2D01G367600.2	Wheat	plastid	37.3	29.94
HORVU2Hr1G114340.4	Barley	endoplasmic reticulum, golgi	43.25	29.86
TraesCS2B01G388100.1	Wheat	cytosol	37.3	29.84
TraesCS1A01G408800.1	Wheat	cytosol	40.08	29.79
HORVU2Hr1G091440.3	Barley	mitochondrion	41.67	29.49
KXG31187	Sorghum	mitochondrion	33.73	28.62
TraesCS2B01G388200.2	Wheat	cytosol	30.16	28.15
OQU85768	Sorghum	cytosol	39.68	27.86
VIT_00s0283g00070.t01	Wine grape	cytosol	32.54	26.2
VIT_05s0094g00770.t01	Wine grape	cytosol	29.37	24.92
TraesCS7A01G111500.1	Wheat	cytosol	20.24	22.97
VIT_15s0046g03530.t01	Wine grape	cytosol	30.56	22.51
Os02t0640600-00	Rice	mitochondrion	31.75	21.51
HORVU5Hr1G031520.2	Barley	cytosol	20.63	18.57
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	8.73	17.32
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	44.05	14.94
HORVU5Hr1G031560.1	Barley	cytosol	5.56	11.02
Os04t0531700-01	Rice	mitochondrion	3.97	9.17
Os04t0531750-00	Rice	mitochondrion	5.56	4.23

Protein Annotations

ArrayExpress:VIT_06s0009g01450	EMBL:FN595504	EnsemblPlants:VIT_06s0009g01450.t01	EnsemblPlantsGene:VIT_06s0009g01450	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR43490	PANTHER:PTHR43490:SF40	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CCB49158
ProteinID:CCB49158.1	SUPFAM:SSF51735	UniParc:UPI000210A3C3	UniProt:F6HA27	MapMan:50.1.1	:

Description

No Description!

Coordinates

chr6:+:13207783..13215862

Molecular Weight (calculated)

27788.5 Da

IEP (calculated)

7.337

GRAVY (calculated)

-0.175

Length

252 amino acids

Sequence
(BLAST)

001: MRLPLPNSKS FPFPERLVCF RLKPSNCFHQ ASLSSTSLEV NNAGASGVIV DEQGLKALNI DPASWLSGKA TNLVQAVIKQ TYEKAEECLN TNYYGCKRVT
101: EALLPLLKLS TLGARIINVS SLRGELKRIP SEKIRNELGD MESLMEDKLD AILEKFLHDL KANALQANGW SVMLPSYSIS KATLNAYTRV LAKKYPEMCI
201: NCVHPGYVDT DINWHTGTMT VEEGARGSVK LALLPDGGPT GCYFDRTEVA DF

Best Arabidopsis Sequence Match ( AT2G24190.1 )
(BLAST)

001: MAEESPRYAI VTGGNRGIGF EICRQLANKG IRVILTSRDE KQGLEAVETL KKELEISDQS IVFHQLDVSD PVSVTSLAEF VKTHFGKLDI LINNAGVGGV
101: ITDVDALRAG TGKEGFKWEE TITETYELAE ECIKINYYGP KRMCEAFIPL LQLSDSPRII NVSSFMGQVK NLVNEWAKGI LSDAENLTEV RIDQVINQLL
201: NDLKEDTAKT KYWAKVMSAY VVSKAGLNAY TRILAKKHPE IRVNSVCPGF VKTDMNFKTG ILSVEEGASS PVRLALLPHQ ESPSGCFFDR KQVSEF

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G24190]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.