Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G371400.1 | Wheat | cytosol, plastid | 91.5 | 91.5 |
| TraesCS2A01G371200.1 | Wheat | cytosol | 89.87 | 90.16 |
| TraesCS2D01G367600.2 | Wheat | plastid | 90.85 | 88.53 |
| TraesCS2D01G367700.1 | Wheat | mitochondrion | 89.22 | 88.35 |
| TraesCS2B01G388200.2 | Wheat | cytosol | 63.73 | 72.22 |
| Os04t0531900-01 | Rice | cytosol, plastid | 72.22 | 71.99 |
| Os04t0532400-01 | Rice | cytosol | 70.59 | 70.36 |
| TraesCS2B01G388300.1 | Wheat | cytosol | 67.32 | 66.03 |
| TraesCS2B01G388500.1 | Wheat | cytosol, mitochondrion, nucleus | 30.72 | 59.12 |
| TraesCS2B01G388700.1 | Wheat | cytosol, plastid | 57.52 | 57.52 |
| TraesCS2B01G544800.1 | Wheat | cytosol | 55.88 | 55.52 |
| KRH40499 | Soybean | cytosol | 18.95 | 52.73 |
| TraesCS2B01G388100.1 | Wheat | cytosol | 54.25 | 52.7 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 50.65 | 52.19 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 50.65 | 52.19 |
| Bra032567.1-P | Field mustard | cytosol | 19.93 | 52.14 |
| TraesCS1B01G437500.1 | Wheat | cytosol | 52.61 | 51.6 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 50.0 | 51.34 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 49.35 | 50.67 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 49.02 | 50.34 |
| KRH00691 | Soybean | cytosol | 41.83 | 50.2 |
| KRH00696 | Soybean | mitochondrion | 48.04 | 50.0 |
| KRH40500 | Soybean | cytosol, nucleus | 47.71 | 49.66 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 48.04 | 49.49 |
| PGSC0003DMT400000067 | Potato | golgi, peroxisome | 47.06 | 49.48 |
| VIT_06s0061g00670.t01 | Wine grape | plastid | 49.02 | 49.34 |
| KRH48196 | Soybean | cytosol | 47.71 | 49.32 |
| Solyc01g094210.2.1 | Tomato | cytosol | 47.39 | 48.82 |
| KRH48198 | Soybean | cytosol | 46.08 | 48.79 |
| Solyc01g099560.2.1 | Tomato | cytosol | 28.1 | 48.59 |
| Bra032573.1-P | Field mustard | cytosol | 21.24 | 48.51 |
| PGSC0003DMT400048179 | Potato | cytosol | 47.06 | 48.16 |
| PGSC0003DMT400048181 | Potato | cytosol | 47.06 | 48.16 |
| Solyc11g071460.1.1 | Tomato | cytosol | 47.06 | 48.16 |
| KRH65113 | Soybean | cytosol | 46.73 | 47.83 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 31.05 | 47.74 |
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 47.06 | 47.37 |
| KRH48194 | Soybean | cytosol | 46.08 | 47.32 |
| KRH48202 | Soybean | cytosol | 46.08 | 47.16 |
| PGSC0003DMT400000078 | Potato | cytosol | 46.08 | 47.0 |
| Solyc01g094220.2.1 | Tomato | cytosol | 46.08 | 47.0 |
| CDY48937 | Canola | cytosol | 45.1 | 46.62 |
| CDX71758 | Canola | cytosol | 45.1 | 46.62 |
| Bra007585.1-P | Field mustard | cytosol | 45.1 | 46.62 |
| PGSC0003DMT400088659 | Potato | cytosol | 17.97 | 46.61 |
| KRH65114 | Soybean | cytosol | 44.77 | 46.6 |
| KRH48206 | Soybean | cytosol | 46.41 | 46.56 |
| PGSC0003DMT400047834 | Potato | cytosol | 45.42 | 46.49 |
| Bra014448.1-P | Field mustard | cytosol | 44.77 | 46.13 |
| TraesCS2B01G116700.1 | Wheat | mitochondrion | 47.06 | 45.86 |
| CDX89104 | Canola | cytosol | 41.18 | 45.65 |
| CDY56927 | Canola | endoplasmic reticulum, golgi | 44.77 | 44.77 |
| AT1G01800.1 | Thale cress | cytosol | 42.81 | 44.41 |
| KRH65115 | Soybean | cytosol | 46.73 | 44.0 |
| KRH17659 | Soybean | cytosol | 14.05 | 43.88 |
| AT2G24190.2 | Thale cress | cytosol | 43.14 | 43.85 |
| PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 43.79 | 43.79 |
| Solyc01g094270.2.1 | Tomato | cytosol, plastid | 44.77 | 43.49 |
| PGSC0003DMT400048175 | Potato | cytosol, peroxisome, plastid | 17.97 | 43.31 |
| Solyc01g094240.2.1 | Tomato | cytosol | 44.77 | 43.08 |
| Bra033230.1-P | Field mustard | cytosol | 41.18 | 42.71 |
| CDX90062 | Canola | cytosol | 41.18 | 42.71 |
| CDY15148 | Canola | cytosol | 41.18 | 42.71 |
| Solyc01g094260.2.1 | Tomato | cytosol | 43.79 | 42.01 |
| PGSC0003DMT400026580 | Potato | cytosol | 42.48 | 41.94 |
| AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 44.77 | 41.9 |
| Solyc10g017570.2.1 | Tomato | cytosol | 42.16 | 41.61 |
| Solyc01g094250.2.1 | Tomato | cytosol | 43.14 | 41.38 |
| TraesCS2B01G371400.1 | Wheat | peroxisome | 38.89 | 40.75 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 33.01 | 40.08 |
| TraesCS6B01G247400.1 | Wheat | peroxisome | 38.24 | 40.07 |
| TraesCS2B01G117000.1 | Wheat | plastid | 47.39 | 38.46 |
| KRH40504 | Soybean | endoplasmic reticulum | 47.06 | 36.92 |
| Solyc11g042710.1.1 | Tomato | cytosol | 18.95 | 36.71 |
| TraesCS3B01G477700.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 34.97 | 33.33 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 24.18 | 21.64 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 48.69 | 20.05 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G388600.1 | EnsemblPlantsGene:TraesCS2B01G388600 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF19 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SUPFAM:SSF51735 | MapMan:50.1.1 |
Description
No Description!
Coordinates
chr2B:-:551564248..551565764
Molecular Weight (calculated)
33134.6 Da
IEP (calculated)
5.930
GRAVY (calculated)
-0.180
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGPVLPNLP NTRVAVVTGG NKGIGFEVCR QLASGGVTVV LTARDETRGG EAVERLNALG LSGVIFHRLE ITDASSAATL AGFLKARFGK LDILVNNAAV
101: GGVEYGQEFD TNEEKFGGMD FHQRVEWMLK NAREPIDSAK NSVQTNYYGT KHVIEALLPL LQSSSVGRIV NVSSNYGLLR HIGSEEVRQE LNDVDNLTEG
201: RLDELLEKFM KDFEAGALEP HGWPTKFSAY KVAKAAMNAY SRILARRHPE LRVNCAHPGF VKTDMSMGSG VLTPEEGARN LVKVALLPDG GPTGAYFAMG
301: EEAPFV
101: GGVEYGQEFD TNEEKFGGMD FHQRVEWMLK NAREPIDSAK NSVQTNYYGT KHVIEALLPL LQSSSVGRIV NVSSNYGLLR HIGSEEVRQE LNDVDNLTEG
201: RLDELLEKFM KDFEAGALEP HGWPTKFSAY KVAKAAMNAY SRILARRHPE LRVNCAHPGF VKTDMSMGSG VLTPEEGARN LVKVALLPDG GPTGAYFAMG
301: EEAPFV
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.