Factsheet for TraesCS6B01G247400.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G218000.1	Wheat	peroxisome	98.97	98.97
TraesCS6D01G200400.1	Wheat	peroxisome	97.6	97.6
HORVU6Hr1G055660.3	Barley	cytosol, peroxisome, plastid	96.92	96.92
Os02t0607700-01	Rice	cytosol, peroxisome, plastid	88.7	86.91
EES07125	Sorghum	cytosol, peroxisome, plastid	83.56	78.71
TraesCS2B01G371400.1	Wheat	peroxisome	77.4	77.4
Zm00001d051041_P001	Maize	peroxisome	82.19	75.95
GSMUA_Achr8P28970_001	Banana	peroxisome	65.75	65.08
VIT_05s0094g00770.t01	Wine grape	cytosol	59.25	58.25
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	59.59	57.43
KRH50192	Soybean	cytosol	58.56	56.44
CDY05983	Canola	cytosol, peroxisome, plastid	54.79	54.79
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	22.95	54.47
CDX67809	Canola	peroxisome	54.79	54.24
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	55.14	54.21
Bra007472.1-P	Field mustard	cytosol, peroxisome, plastid	54.11	54.11
CDX71880	Canola	peroxisome	54.11	54.11
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	56.51	51.4
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	44.52	40.5
TraesCS2B01G388600.1	Wheat	cytosol, plastid	40.07	38.24
TraesCS2B01G544800.1	Wheat	cytosol	40.07	37.99
TraesCS2B01G388300.1	Wheat	cytosol	40.07	37.5
TraesCS2B01G388700.1	Wheat	cytosol, plastid	38.01	36.27
TraesCS2B01G388200.2	Wheat	cytosol	32.88	35.56
TraesCS1B01G437500.1	Wheat	cytosol	37.67	35.26
TraesCS2B01G116700.1	Wheat	mitochondrion	37.67	35.03
TraesCS2B01G388100.1	Wheat	cytosol	36.99	34.29
TraesCS2B01G117000.1	Wheat	plastid	37.67	29.18
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	15.41	28.3

Protein Annotations

EnsemblPlants:TraesCS6B01G247400.1	EnsemblPlantsGene:TraesCS6B01G247400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	ncoils:Coil
PANTHER:PTHR43490	PANTHER:PTHR43490:SF37	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	MapMan:50.1.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:440555414..440559372

Molecular Weight (calculated)

31696.9 Da

IEP (calculated)

9.246

GRAVY (calculated)

-0.097

Length

292 amino acids

Sequence
(BLAST)

001: MDCSSSKETP PHKAWWTGET VAVVTGANRG IGHALAARLA EQGLSVVLTA RDEARGEAAA AELRARGLPS VRFRCLDVTD PASVAAFASW IRDHVGGLDI
101: LVNNAGVSFN EIDTNSVEHA ETVLKTNFYG AKMLIEALLP LFRRSSGTSR ILNLSSQLGL LNKVRDPSLR SMLLDEGRLT EQQVEAMASR FLAQVKDGTW
201: QDHGWPAVWT DYAVSKLALN AYSRLLAARL RGAVAVNCFC PGFTRTDMTR GWGKRTAEEA GRVAAGLALL PPADLPTGKF FKWSTPQLYS KL

Best Arabidopsis Sequence Match ( AT3G59710.3 )
(BLAST)

001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.