Factsheet for TraesCS2B01G388300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G371000.1	Wheat	cytosol	93.59	94.81
HORVU5Hr1G031560.1	Barley	cytosol	36.22	88.98
TraesCS2D01G367400.1	Wheat	plastid	96.79	86.78
HORVU2Hr1G091440.3	Barley	mitochondrion	91.67	80.34
TraesCS2B01G388600.1	Wheat	cytosol, plastid	66.03	67.32
TraesCS2B01G388200.2	Wheat	cytosol	55.45	64.07
TraesCS2B01G388700.1	Wheat	cytosol, plastid	57.05	58.17
TraesCS2B01G544800.1	Wheat	cytosol	55.13	55.84
KRH40499	Soybean	cytosol	19.23	54.55
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	27.56	54.09
VIT_15s0046g03650.t01	Wine grape	cytosol	50.64	53.02
VIT_15s0046g03600.t01	Wine grape	cytosol	50.32	52.68
KRH48198	Soybean	cytosol	48.72	52.6
KRH48196	Soybean	cytosol	49.68	52.36
VIT_15s0046g03550.t01	Wine grape	cytosol	50.0	52.35
PGSC0003DMT400000067	Potato	golgi, peroxisome	48.08	51.55
KRH40500	Soybean	cytosol, nucleus	48.4	51.36
TraesCS1B01G437500.1	Wheat	cytosol	51.28	51.28
VIT_15s0046g03570.t01	Wine grape	plastid	48.72	51.18
KRH00696	Soybean	mitochondrion	48.08	51.02
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	48.4	50.84
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	48.4	50.84
TraesCS2B01G388100.1	Wheat	cytosol	51.28	50.79
KRH48206	Soybean	cytosol	49.36	50.49
KRH48194	Soybean	cytosol	48.08	50.34
KRH65113	Soybean	cytosol	48.08	50.17
KRH48202	Soybean	cytosol	47.76	49.83
Solyc01g094210.2.1	Tomato	cytosol	47.44	49.83
KRH00691	Soybean	cytosol	40.71	49.8
Solyc01g099560.2.1	Tomato	cytosol	27.88	49.15
Solyc01g094220.2.1	Tomato	cytosol	47.12	49.0
VIT_02s0025g04510.t01	Wine grape	cytosol	31.09	48.74
VIT_06s0061g00670.t01	Wine grape	plastid	47.44	48.68
PGSC0003DMT400000078	Potato	cytosol	46.79	48.67
KRH65114	Soybean	cytosol	45.51	48.3
PGSC0003DMT400048181	Potato	cytosol	46.15	48.16
Bra032567.1-P	Field mustard	cytosol	17.95	47.86
PGSC0003DMT400048179	Potato	cytosol	45.83	47.83
Solyc11g071460.1.1	Tomato	cytosol	45.83	47.83
VIT_06s0061g00640.t01	Wine grape	cytosol	46.47	47.7
KRH17659	Soybean	cytosol	14.74	46.94
PGSC0003DMT400047834	Potato	cytosol	44.87	46.82
CDX71758	Canola	cytosol	44.23	46.62
PGSC0003DMT400088659	Potato	cytosol	17.63	46.61
Bra014448.1-P	Field mustard	cytosol	43.91	46.13
Bra007585.1-P	Field mustard	cytosol	43.59	45.95
CDY48937	Canola	cytosol	43.59	45.95
TraesCS2B01G116700.1	Wheat	mitochondrion	46.15	45.86
KRH65115	Soybean	cytosol	47.76	45.85
AT1G01800.1	Thale cress	cytosol	43.27	45.76
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	44.55	45.42
CDX89104	Canola	cytosol	40.06	45.29
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	18.27	44.88
Solyc01g094270.2.1	Tomato	cytosol, plastid	45.19	44.76
AT2G24190.2	Thale cress	cytosol	42.63	44.19
CDY56927	Canola	endoplasmic reticulum, golgi	43.27	44.12
Bra033230.1-P	Field mustard	cytosol	41.67	44.07
Bra032573.1-P	Field mustard	cytosol	18.91	44.03
CDY15148	Canola	cytosol	41.35	43.73
CDX90062	Canola	cytosol	41.35	43.73
Solyc01g094260.2.1	Tomato	cytosol	44.23	43.26
Solyc01g094240.2.1	Tomato	cytosol	43.91	43.08
Solyc01g094250.2.1	Tomato	cytosol	43.91	42.95
PGSC0003DMT400026580	Potato	cytosol	42.63	42.9
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	44.87	42.81
Solyc10g017570.2.1	Tomato	cytosol	41.99	42.26
VIT_06s0009g01450.t01	Wine grape	plastid	33.01	40.87
TraesCS6B01G247400.1	Wheat	peroxisome	37.5	40.07
TraesCS2B01G371400.1	Wheat	peroxisome	37.18	39.73
TraesCS2B01G117000.1	Wheat	plastid	46.15	38.2
KRH40504	Soybean	endoplasmic reticulum	47.12	37.69
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	34.29	33.33
Solyc11g042710.1.1	Tomato	cytosol	15.71	31.01
VIT_15s0046g03530.t01	Wine grape	cytosol	23.08	21.05
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	48.72	20.46

Protein Annotations

EnsemblPlants:TraesCS2B01G388300.1	EnsemblPlantsGene:TraesCS2B01G388300	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	ncoils:Coil
PANTHER:PTHR43490	PANTHER:PTHR43490:SF26	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SUPFAM:SSF51735
TIGR:cd05324	MapMan:50.1.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:551448513..551451312

Molecular Weight (calculated)

33748.9 Da

IEP (calculated)

4.979

GRAVY (calculated)

-0.248

Length

312 amino acids

Sequence
(BLAST)

001: MEGATPTPAP SNTRIAVVTG GSKGIGLEAC KQLAGGGAIT VVLTARDEAR GTAAVEQIKR LGHADVIFHQ LDITDASSIA RLADFIKTRF AKLDILVNNA
101: ATDGIEHVID PVYGLTPGDE TFNGMDAGQR IDWMWTSCRQ TYETAKQGLQ TNYYGTKRVT EALLPLLRSS SDGRIVNVSS NFGLLSFFRN EELKQELNDV
201: DNLTEEGLDE LLAMFLKDFE SGGAEARGWP AEFSAYKVAK AAMNAYSRIL AKRHPELRVN CAHPGYVKTD ITRNSGILTP EEGARNITSV ALLPEGGPTG
301: KYFSEGEEAS FV

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.