Factsheet for TraesCS2B01G388500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82017	Sorghum	extracellular	67.3	64.85
PGSC0003DMT400088659	Potato	cytosol	34.59	46.61
TraesCS2B01G388700.1	Wheat	cytosol, plastid	87.42	45.42
TraesCS2A01G371300.1	Wheat	cytosol	84.28	44.67
Solyc01g099560.2.1	Tomato	cytosol	37.74	33.9
VIT_02s0025g04510.t01	Wine grape	cytosol	39.62	31.66
TraesCS2B01G388600.1	Wheat	cytosol, plastid	59.12	30.72
TraesCS2B01G544800.1	Wheat	cytosol	54.09	27.92
TraesCS2B01G388300.1	Wheat	cytosol	54.09	27.56
VIT_06s0009g01450.t01	Wine grape	plastid	42.14	26.59
VIT_15s0046g03550.t01	Wine grape	cytosol	43.4	23.15
KRH00691	Soybean	cytosol	37.11	23.14
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	42.77	22.9
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	42.77	22.9
TraesCS2B01G388100.1	Wheat	cytosol	45.28	22.86
VIT_15s0046g03650.t01	Wine grape	cytosol	42.14	22.48
VIT_15s0046g03600.t01	Wine grape	cytosol	41.51	22.15
Solyc11g071460.1.1	Tomato	cytosol	41.51	22.07
KRH65113	Soybean	cytosol	41.51	22.07
VIT_15s0046g03570.t01	Wine grape	plastid	40.88	21.89
PGSC0003DMT400048181	Potato	cytosol	40.88	21.74
PGSC0003DMT400048179	Potato	cytosol	40.25	21.4
PGSC0003DMT400000067	Potato	golgi, peroxisome	38.99	21.31
KRH48196	Soybean	cytosol	39.62	21.28
KRH65114	Soybean	cytosol	38.99	21.09
PGSC0003DMT400047834	Potato	cytosol	39.62	21.07
KRH48206	Soybean	cytosol	40.25	20.98
KRH00696	Soybean	mitochondrion	38.36	20.75
KRH40500	Soybean	cytosol, nucleus	38.36	20.75
TraesCS2B01G388200.2	Wheat	cytosol	35.22	20.74
Bra007585.1-P	Field mustard	cytosol	38.36	20.61
CDX71758	Canola	cytosol	38.36	20.61
CDY48937	Canola	cytosol	38.36	20.61
Solyc01g094210.2.1	Tomato	cytosol	38.36	20.54
TraesCS1B01G437500.1	Wheat	cytosol	40.25	20.51
Solyc01g094220.2.1	Tomato	cytosol	38.36	20.33
AT2G24190.2	Thale cress	cytosol	38.36	20.27
KRH48194	Soybean	cytosol	37.74	20.13
KRH48198	Soybean	cytosol	36.48	20.07
VIT_06s0061g00670.t01	Wine grape	plastid	38.36	20.07
Bra014448.1-P	Field mustard	cytosol	37.11	19.87
KRH48202	Soybean	cytosol	37.11	19.73
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	37.74	19.61
TraesCS2B01G116700.1	Wheat	mitochondrion	38.36	19.43
VIT_06s0061g00640.t01	Wine grape	cytosol	37.11	19.41
Solyc01g094270.2.1	Tomato	cytosol, plastid	38.36	19.37
PGSC0003DMT400000078	Potato	cytosol	36.48	19.33
Solyc01g094250.2.1	Tomato	cytosol	38.36	19.12
Solyc01g094260.2.1	Tomato	cytosol	38.36	19.12
CDY56927	Canola	endoplasmic reticulum, golgi	36.48	18.95
Solyc01g094240.2.1	Tomato	cytosol	37.74	18.87
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	37.74	18.35
CDX89104	Canola	cytosol	30.82	17.75
AT1G01800.1	Thale cress	cytosol	32.7	17.63
KRH65115	Soybean	cytosol	35.22	17.23
CDY15148	Canola	cytosol	31.45	16.95
CDX90062	Canola	cytosol	31.45	16.95
Bra033230.1-P	Field mustard	cytosol	31.45	16.95
PGSC0003DMT400026580	Potato	cytosol	32.7	16.77
Solyc10g017570.2.1	Tomato	cytosol	32.7	16.77
TraesCS2B01G117000.1	Wheat	plastid	39.62	16.71
TraesCS2B01G371400.1	Wheat	peroxisome	30.19	16.44
KRH40504	Soybean	endoplasmic reticulum	38.99	15.9
TraesCS6B01G247400.1	Wheat	peroxisome	28.3	15.41
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	27.67	13.71
Solyc11g042710.1.1	Tomato	cytosol	11.95	12.03
VIT_15s0046g03530.t01	Wine grape	cytosol	25.79	11.99
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	39.62	8.48
KRH17659	Soybean	cytosol	3.14	5.1
Os04t0531750-00	Rice	mitochondrion	9.43	4.53
Os04t0531700-01	Rice	mitochondrion	2.52	3.67
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	1.26	1.57
Bra032573.1-P	Field mustard	cytosol	1.26	1.49
KRH40499	Soybean	cytosol	0.63	0.91
Bra032567.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS2B01G388500.1	EnsemblPlantsGene:TraesCS2B01G388500	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490
PANTHER:PTHR43490:SF26	PFAM:PF13561	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735	MapMan:50.1.1

Description

No Description!

Coordinates

chr2B:-:551534158..551535195

Molecular Weight (calculated)

17956.2 Da

IEP (calculated)

4.426

GRAVY (calculated)

-0.465

Length

159 amino acids

Sequence
(BLAST)

001: MDVDQRVQWM KENSKETYEE AKESNKYCFL EQNFNSEELK KEFDDIDNLS EKRLEELLDL FLEDFKANLI EAHGWPTGGS SAYKVAKAAL NAYTRILAKT
101: FPPMRINCLT PGFVKSDMSM HMGVLTPEEG ASNLVKVALL PDDGPTGAYF DRDGVASFV

Best Arabidopsis Sequence Match ( AT2G24190.1 )
(BLAST)

001: MAEESPRYAI VTGGNRGIGF EICRQLANKG IRVILTSRDE KQGLEAVETL KKELEISDQS IVFHQLDVSD PVSVTSLAEF VKTHFGKLDI LINNAGVGGV
101: ITDVDALRAG TGKEGFKWEE TITETYELAE ECIKINYYGP KRMCEAFIPL LQLSDSPRII NVSSFMGQVK NLVNEWAKGI LSDAENLTEV RIDQVINQLL
201: NDLKEDTAKT KYWAKVMSAY VVSKAGLNAY TRILAKKHPE IRVNSVCPGF VKTDMNFKTG ILSVEEGASS PVRLALLPHQ ESPSGCFFDR KQVSEF

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G24190]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.