Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G517700.1 | Wheat | cytosol | 93.51 | 93.51 |
| TraesCS2A01G516200.2 | Wheat | mitochondrion | 90.91 | 92.11 |
| HORVU2Hr1G114340.4 | Barley | endoplasmic reticulum, golgi | 91.88 | 77.53 |
| EES07552 | Sorghum | cytosol | 66.88 | 66.88 |
| EES07551 | Sorghum | cytosol | 63.31 | 64.36 |
| EES07553 | Sorghum | cytosol | 62.99 | 62.78 |
| KXG31133 | Sorghum | cytosol | 59.09 | 62.76 |
| Zm00001d051259_P001 | Maize | cytosol | 36.69 | 59.79 |
| TraesCS2B01G388100.1 | Wheat | cytosol | 61.04 | 59.68 |
| TraesCS1B01G437500.1 | Wheat | cytosol | 59.74 | 58.97 |
| TraesCS2B01G388700.1 | Wheat | cytosol, plastid | 57.79 | 58.17 |
| Zm00001d051251_P003 | Maize | cytosol | 49.35 | 57.58 |
| TraesCS2B01G388600.1 | Wheat | cytosol, plastid | 55.52 | 55.88 |
| TraesCS2B01G388300.1 | Wheat | cytosol | 55.84 | 55.13 |
| TraesCS2B01G388500.1 | Wheat | cytosol, mitochondrion, nucleus | 27.92 | 54.09 |
| OQU85768 | Sorghum | cytosol | 62.99 | 54.04 |
| TraesCS2B01G388200.2 | Wheat | cytosol | 45.78 | 52.22 |
| VIT_06s0061g00670.t01 | Wine grape | plastid | 51.3 | 51.97 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 50.0 | 51.68 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 49.68 | 51.34 |
| Bra032567.1-P | Field mustard | cytosol | 19.48 | 51.28 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 49.35 | 51.18 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 49.35 | 51.18 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 49.35 | 51.01 |
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 50.32 | 50.99 |
| KRH40499 | Soybean | cytosol | 18.18 | 50.91 |
| KRH00691 | Soybean | cytosol | 41.56 | 50.2 |
| KRH48198 | Soybean | cytosol | 47.08 | 50.17 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 48.38 | 50.17 |
| PGSC0003DMT400000078 | Potato | cytosol | 48.7 | 50.0 |
| KRH00696 | Soybean | mitochondrion | 47.4 | 49.66 |
| Zm00001d051254_P001 | Maize | cytosol | 36.69 | 49.34 |
| Solyc01g094220.2.1 | Tomato | cytosol | 48.05 | 49.33 |
| Solyc11g071460.1.1 | Tomato | cytosol | 47.73 | 49.16 |
| PGSC0003DMT400048179 | Potato | cytosol | 47.73 | 49.16 |
| KRH48196 | Soybean | cytosol | 47.08 | 48.99 |
| PGSC0003DMT400048181 | Potato | cytosol | 47.4 | 48.83 |
| PGSC0003DMT400047834 | Potato | cytosol | 47.4 | 48.83 |
| KRH40500 | Soybean | cytosol, nucleus | 46.1 | 48.3 |
| KRH48206 | Soybean | cytosol | 47.73 | 48.2 |
| KRH65113 | Soybean | cytosol | 46.75 | 48.16 |
| PGSC0003DMT400000067 | Potato | golgi, peroxisome | 45.45 | 48.11 |
| Bra033230.1-P | Field mustard | cytosol | 45.78 | 47.8 |
| CDX71758 | Canola | cytosol | 45.78 | 47.64 |
| Solyc01g099560.2.1 | Tomato | cytosol | 27.27 | 47.46 |
| CDX90062 | Canola | cytosol | 45.45 | 47.46 |
| Bra007585.1-P | Field mustard | cytosol | 45.45 | 47.3 |
| CDY48937 | Canola | cytosol | 45.45 | 47.3 |
| KRH65114 | Soybean | cytosol | 45.13 | 47.28 |
| AT1G01800.1 | Thale cress | cytosol | 45.13 | 47.12 |
| Bra032573.1-P | Field mustard | cytosol | 20.45 | 47.01 |
| KRH48202 | Soybean | cytosol | 45.45 | 46.82 |
| TraesCS2B01G116700.1 | Wheat | mitochondrion | 47.73 | 46.82 |
| CDY15148 | Canola | cytosol | 44.81 | 46.78 |
| KRH48194 | Soybean | cytosol | 45.13 | 46.64 |
| Bra014448.1-P | Field mustard | cytosol | 44.81 | 46.46 |
| AT2G24190.2 | Thale cress | cytosol | 44.81 | 45.85 |
| PGSC0003DMT400088659 | Potato | cytosol | 17.53 | 45.76 |
| CDX89104 | Canola | cytosol | 40.91 | 45.65 |
| Solyc01g094210.2.1 | Tomato | cytosol | 43.83 | 45.45 |
| CDY56927 | Canola | endoplasmic reticulum, golgi | 44.16 | 44.44 |
| AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 46.75 | 44.04 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 28.25 | 43.72 |
| KRH65115 | Soybean | cytosol | 46.1 | 43.69 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 35.71 | 43.65 |
| PGSC0003DMT400048175 | Potato | cytosol, peroxisome, plastid | 17.86 | 43.31 |
| PGSC0003DMT400026580 | Potato | cytosol | 43.51 | 43.23 |
| Solyc10g017570.2.1 | Tomato | cytosol | 42.53 | 42.26 |
| Solyc01g094240.2.1 | Tomato | cytosol | 43.51 | 42.14 |
| PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 41.56 | 41.83 |
| Solyc01g094250.2.1 | Tomato | cytosol | 43.18 | 41.69 |
| Solyc01g094260.2.1 | Tomato | cytosol | 42.86 | 41.38 |
| TraesCS2B01G371400.1 | Wheat | peroxisome | 38.96 | 41.1 |
| Solyc01g094270.2.1 | Tomato | cytosol, plastid | 41.88 | 40.95 |
| KRH17659 | Soybean | cytosol | 12.99 | 40.82 |
| Solyc11g042710.1.1 | Tomato | cytosol | 20.78 | 40.51 |
| TraesCS6B01G247400.1 | Wheat | peroxisome | 37.99 | 40.07 |
| TraesCS2B01G117000.1 | Wheat | plastid | 46.1 | 37.67 |
| KRH40504 | Soybean | endoplasmic reticulum | 46.75 | 36.92 |
| TraesCS3B01G477700.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 34.09 | 32.71 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 24.35 | 21.93 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 50.32 | 20.86 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G544800.1 | EnsemblPlantsGene:TraesCS2B01G544800 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF40 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| MapMan:50.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:741858371..741860494
Molecular Weight (calculated)
33440.7 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.211
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGGATSSS HKRVALVTGA NRGIGLEVCR QLASGGATVV LTARDEKRGA VAVDALRELG LPDVVFHKLD VGEPSSAARL ADFVRDRFGR LDVLVNNAGV
101: SGVRMDIGDP AALHQVRTSM SAVERLEWFN QRTTEPFEEA EECLRTNYHG TKNVTEALLP LLLSSSDARV VNVSSSYGLL RFFSGEELKH ELNDIDNLST
201: ERLDELSGLF LKDFKNGRLD HHGWPVGGFS AYKVSKALIN AYTRVLAKKH TSMRVNCLDP GYVKTDINFH TGVLTVEEGA RGPVMLAHVP KDGPTGAYFN
301: GTEQASFV
101: SGVRMDIGDP AALHQVRTSM SAVERLEWFN QRTTEPFEEA EECLRTNYHG TKNVTEALLP LLLSSSDARV VNVSSSYGLL RFFSGEELKH ELNDIDNLST
201: ERLDELSGLF LKDFKNGRLD HHGWPVGGFS AYKVSKALIN AYTRVLAKKH TSMRVNCLDP GYVKTDINFH TGVLTVEEGA RGPVMLAHVP KDGPTGAYFN
301: GTEQASFV
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.