Factsheet for VIT_06s0061g00640.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0061g00670.t01	Wine grape	plastid	82.89	82.89
VIT_15s0046g03570.t01	Wine grape	plastid	52.63	53.87
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	52.3	53.54
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	52.3	53.54
VIT_15s0046g03550.t01	Wine grape	cytosol	52.3	53.36
VIT_15s0046g03600.t01	Wine grape	cytosol	52.3	53.36
VIT_15s0046g03650.t01	Wine grape	cytosol	51.97	53.02
VIT_02s0025g04510.t01	Wine grape	cytosol	33.22	50.75
TraesCS2A01G516200.2	Wheat	mitochondrion	50.66	50.66
TraesCS2B01G544800.1	Wheat	cytosol	50.99	50.32
KXG31187	Sorghum	mitochondrion	49.01	50.17
TraesCS2D01G517700.1	Wheat	cytosol	50.66	50.0
Os04t0532100-01	Rice	cytosol	50.66	49.84
TraesCS2A01G371100.1	Wheat	cytosol	50.0	49.84
EES07551	Sorghum	cytosol	49.67	49.84
EES07552	Sorghum	cytosol	50.0	49.35
KXG31133	Sorghum	cytosol	47.04	49.31
KXG26779	Sorghum	cytosol	50.33	49.2
EES07553	Sorghum	cytosol	49.34	48.54
EES11175	Sorghum	cytosol, plastid	47.37	48.16
EES11174	Sorghum	cytosol	48.68	47.74
Os04t0531700-01	Rice	mitochondrion	17.11	47.71
TraesCS2A01G370900.1	Wheat	cytosol	48.36	47.57
TraesCS2D01G367200.1	Wheat	cytosol	48.36	47.57
HORVU7Hr1G024270.5	Barley	cytosol	48.03	47.56
Os04t0531900-01	Rice	cytosol, plastid	48.03	47.56
EES07554	Sorghum	cytosol	48.03	47.4
EES11173	Sorghum	cytosol	48.36	47.27
TraesCS7A01G114100.1	Wheat	cytosol	47.7	47.23
TraesCS2B01G388600.1	Wheat	cytosol, plastid	47.37	47.06
TraesCS2B01G388200.2	Wheat	cytosol	41.78	47.04
EES11171	Sorghum	cytosol	48.03	46.95
EES11167	Sorghum	cytosol	47.7	46.77
TraesCS2A01G371000.1	Wheat	cytosol	47.37	46.75
TraesCS2A01G371400.1	Wheat	cytosol, plastid	47.04	46.73
Os04t0532400-01	Rice	cytosol	47.04	46.58
TraesCS2A01G371200.1	Wheat	cytosol	46.71	46.56
EER93229	Sorghum	cytosol	48.03	46.5
TraesCS2B01G388300.1	Wheat	cytosol	47.7	46.47
HORVU5Hr1G031560.1	Barley	cytosol	19.41	46.46
HORVU1Hr1G064390.1	Barley	cytosol	47.37	46.45
TraesCS2D01G367700.1	Wheat	mitochondrion	47.04	46.28
OQU82017	Sorghum	extracellular	25.0	46.06
TraesCS1D01G415900.1	Wheat	cytosol	47.04	45.83
HORVU1Hr1G089830.1	Barley	cytosol	46.71	45.51
TraesCS2B01G388100.1	Wheat	cytosol	47.04	45.4
TraesCS2B01G116700.1	Wheat	mitochondrion	46.71	45.22
TraesCS2D01G367600.2	Wheat	plastid	46.38	44.9
TraesCS1B01G437500.1	Wheat	cytosol	46.05	44.87
TraesCS2D01G367800.1	Wheat	cytosol, plastid	45.07	44.77
TraesCS2B01G388700.1	Wheat	cytosol, plastid	45.07	44.77
HORVU2Hr1G091430.7	Barley	cytosol	46.05	44.73
TraesCS7A01G111500.1	Wheat	cytosol	32.57	44.59
HORVU2Hr1G091460.1	Barley	cytosol, mitochondrion, plastid	46.05	44.59
TraesCS2D01G099300.1	Wheat	cytosol	46.05	44.59
TraesCS2A01G099800.1	Wheat	cytosol	45.72	44.27
EES09734	Sorghum	cytosol	44.74	43.73
OQU85768	Sorghum	cytosol	50.66	42.9
TraesCS2A01G371300.1	Wheat	cytosol	41.78	42.33
EER97757	Sorghum	cytosol	46.05	42.3
HORVU2Hr1G114340.4	Barley	endoplasmic reticulum, golgi	50.33	41.92
TraesCS2D01G367400.1	Wheat	plastid	47.7	41.67
TraesCS1A01G408800.1	Wheat	cytosol	46.38	41.59
TraesCS2A01G371500.1	Wheat	plastid	45.07	40.9
EES17690	Sorghum	cytosol	22.37	40.72
VIT_06s0009g01450.t01	Wine grape	plastid	33.55	40.48
HORVU2Hr1G091440.3	Barley	mitochondrion	47.37	40.45
VIT_00s0283g00070.t01	Wine grape	cytosol	41.12	39.94
VIT_05s0094g00770.t01	Wine grape	cytosol	37.83	38.72
TraesCS2D01G099500.1	Wheat	plastid	46.38	37.5
KXG36979	Sorghum	plastid	46.05	37.43
HORVU2Hr1G017120.1	Barley	plastid	45.07	37.33
Os07t0685800-01	Rice	plastid	45.72	37.27
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	19.41	37.11
TraesCS2A01G100000.2	Wheat	plastid	45.72	36.97
TraesCS2B01G117000.1	Wheat	plastid	45.39	36.6
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	82.57	33.78
HORVU5Hr1G031520.2	Barley	cytosol	30.59	33.21
Os02t0640600-00	Rice	mitochondrion	39.8	32.53
VIT_15s0046g03530.t01	Wine grape	cytosol	25.33	22.51
Os04t0531750-00	Rice	mitochondrion	3.29	3.02

Protein Annotations

EntrezGene:100258443	wikigene:100258443	Gene3D:3.40.50.720	MapMan:50.1.1	EMBL:AM469749	EMBL:AM479408
ProteinID:CAN63803	ProteinID:CAN63803.1	ProteinID:CAN79584	ProteinID:CAN79584.1	ProteinID:CCB44224	ProteinID:CCB44224.1
UniProt:F6GW89	EMBL:FN594957	EntrezGene:LOC100258443	wikigene:LOC100258443	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106
PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR43490	PANTHER:PTHR43490:SF57	InterPro:SDR_fam	SUPFAM:SSF51735
UniParc:UPI000210A310	ArrayExpress:VIT_06s0061g00640	EnsemblPlantsGene:VIT_06s0061g00640	EnsemblPlants:VIT_06s0061g00640.t01	RefSeq:XP_002272868	RefSeq:XP_002272868.2

Description

No Description!

Coordinates

chr6:+:18155810..18159944

Molecular Weight (calculated)

32630.5 Da

IEP (calculated)

5.969

GRAVY (calculated)

0.121

Length

304 amino acids

Sequence
(BLAST)

001: MGLEAQSELA FRCAVVTGAN KGIGLEICRQ LASNGVMVVL TARDEKRGLE AVAKLHESSL SNVVFHRLDV MDAKSITTLA KFIVTHYGKL DILVNNAGVN
101: GAIVDSEALK TLNLGDSKNN ANIAELVNKV LTQTYELAEE CVKTNYHGTR AVTEALLPCL LLSNSGRIVN VSAGLGKLEF VSNERVRMEL NDVDVLSVER
201: LDGIVNEFLN DVKEDMLHDR GWPTQTSAYT ISKAAVNAHT RIVAKSNPSL LINCVCPGSV KTDMTCNTGL VTVDVGAKGP VMLALLPEGG PSGLFFQKME
301: ASIF

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.