Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400022011 | Potato | cytosol, peroxisome, plastid | 27.95 | 67.48 |
| Solyc03g059190.2.1 | Tomato | cytosol, peroxisome, plastid | 67.0 | 67.0 |
| GSMUA_Achr8P28970_001 | Banana | peroxisome | 62.63 | 63.05 |
| KRH50192 | Soybean | cytosol | 64.31 | 63.04 |
| KRH71272 | Soybean | cytosol, mitochondrion, peroxisome | 63.97 | 62.71 |
| Zm00001d025761_P002 | Maize | mitochondrion | 59.93 | 60.96 |
| OQU81866 | Sorghum | cytosol, peroxisome, plastid | 58.59 | 60.0 |
| TraesCS2A01G353500.1 | Wheat | peroxisome | 58.92 | 59.93 |
| CDY05983 | Canola | cytosol, peroxisome, plastid | 58.92 | 59.93 |
| HORVU6Hr1G055660.3 | Barley | cytosol, peroxisome, plastid | 58.92 | 59.93 |
| HORVU2Hr1G085650.1 | Barley | cytosol, peroxisome | 47.47 | 59.75 |
| TraesCS2B01G371400.1 | Wheat | peroxisome | 58.59 | 59.59 |
| CDX71880 | Canola | peroxisome | 58.59 | 59.59 |
| Bra007472.1-P | Field mustard | cytosol, peroxisome, plastid | 58.59 | 59.59 |
| CDX67809 | Canola | peroxisome | 58.92 | 59.32 |
| TraesCS6B01G247400.1 | Wheat | peroxisome | 58.25 | 59.25 |
| TraesCS2D01G350600.1 | Wheat | peroxisome | 58.25 | 59.25 |
| TraesCS6D01G200400.1 | Wheat | peroxisome | 57.91 | 58.9 |
| TraesCS6A01G218000.1 | Wheat | peroxisome | 57.91 | 58.9 |
| Zm00001d003174_P001 | Maize | extracellular, mitochondrion | 58.25 | 58.84 |
| Os02t0607700-01 | Rice | cytosol, peroxisome, plastid | 58.92 | 58.72 |
| Os04t0496000-01 | Rice | cytosol, peroxisome | 27.95 | 58.45 |
| EES07125 | Sorghum | cytosol, peroxisome, plastid | 58.59 | 56.13 |
| AT3G59710.2 | Thale cress | cytosol, peroxisome, plastid | 60.27 | 55.76 |
| Zm00001d051041_P001 | Maize | peroxisome | 58.59 | 55.06 |
| Zm00001d003173_P001 | Maize | cytosol | 54.55 | 42.52 |
| VIT_00s0283g00070.t01 | Wine grape | cytosol | 44.11 | 41.85 |
| Os04t0496150-00 | Rice | cytosol | 22.22 | 41.51 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 39.73 | 39.73 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 39.39 | 39.39 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 39.39 | 39.39 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 39.06 | 38.93 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 38.72 | 38.59 |
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 38.72 | 37.83 |
| VIT_06s0061g00670.t01 | Wine grape | plastid | 38.72 | 37.83 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 37.71 | 37.58 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 21.55 | 32.16 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 24.92 | 29.37 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 40.07 | 16.02 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 18.18 | 15.79 |
Protein Annotations
| EntrezGene:100264726 | wikigene:100264726 | Gene3D:3.40.50.720 | MapMan:50.1.1 | ProteinID:CCB49394 | ProteinID:CCB49394.1 |
| UniProt:F6HB25 | EMBL:FN595507 | EntrezGene:LOC100264726 | wikigene:LOC100264726 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 |
| PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | PANTHER:PTHR43490 | PANTHER:PTHR43490:SF8 | InterPro:SDR_fam |
| SUPFAM:SSF51735 | UniParc:UPI00019834C0 | ArrayExpress:VIT_05s0094g00770 | EnsemblPlantsGene:VIT_05s0094g00770 | EnsemblPlants:VIT_05s0094g00770.t01 | RefSeq:XP_002274731 |
| RefSeq:XP_002274731.2 | RefSeq:XP_010650717.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5:-:24089120..24092575
Molecular Weight (calculated)
32876.7 Da
IEP (calculated)
9.792
GRAVY (calculated)
-0.103
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: MESKDVEPPF FPPPLLSTRW WSKDTVAIVT GANKGIGFAL VKRLAESGLT VILTARDEAR GLKALQSLAA QGLHVHFSLL DVSNPDSIQT FASWFQHSFR
101: KLDILVNNAG VSFNNINENS VEHAEVVIKT NYYGPKMLIE ALLPMFRRSS SVSRILNISS RLGLLNKLKN PNIKEILLDE EKLSKDQIDR IVSMFLENVK
201: TGTWKNQGWP EIWTDYAVSK LALNAYSRVL AKRYKGCGLS VNCFCPGFTQ TTMTGGKGNH TADAAASIGA RLALLPPEEL PTGKFYLGFS PQVYSKL
101: KLDILVNNAG VSFNNINENS VEHAEVVIKT NYYGPKMLIE ALLPMFRRSS SVSRILNISS RLGLLNKLKN PNIKEILLDE EKLSKDQIDR IVSMFLENVK
201: TGTWKNQGWP EIWTDYAVSK LALNAYSRVL AKRYKGCGLS VNCFCPGFTQ TTMTGGKGNH TADAAASIGA RLALLPPEEL PTGKFYLGFS PQVYSKL
001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [peroxisome,plastid,cytosol]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.