Factsheet for Zm00001d003173_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003174_P001	Maize	extracellular, mitochondrion	66.93	86.73
Zm00001d025761_P002	Maize	mitochondrion	63.52	82.88
OQU81866	Sorghum	cytosol, peroxisome, plastid	62.99	82.76
TraesCS2A01G353500.1	Wheat	peroxisome	57.22	74.66
TraesCS2D01G350600.1	Wheat	peroxisome	56.43	73.63
TraesCS2B01G371400.1	Wheat	peroxisome	56.43	73.63
HORVU2Hr1G085650.1	Barley	cytosol, peroxisome	43.83	70.76
Zm00001d051041_P001	Maize	peroxisome	52.76	63.61
GSMUA_Achr8P28970_001	Banana	peroxisome	46.72	60.34
VIT_05s0094g00770.t01	Wine grape	cytosol	42.52	54.55
KRH50192	Soybean	cytosol	42.52	53.47
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	42.26	53.14
Bra007472.1-P	Field mustard	cytosol, peroxisome, plastid	39.37	51.37
CDY05983	Canola	cytosol, peroxisome, plastid	39.37	51.37
CDX71880	Canola	peroxisome	38.58	50.34
CDX67809	Canola	peroxisome	38.85	50.17
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	38.85	49.83
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	40.42	47.98
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	14.7	45.53
Zm00001d051259_P001	Maize	cytosol	20.47	41.27
Zm00001d002845_P001	Maize	cytosol	6.04	39.66
Zm00001d042250_P001	Maize	cytosol	33.33	39.2
Zm00001d002847_P001	Maize	cytosol	29.92	36.31
Zm00001d025923_P001	Maize	cytosol	29.4	36.01
Zm00001d025922_P001	Maize	nucleus	28.61	35.05
Zm00001d002848_P001	Maize	cytosol, plastid	28.35	33.86
Zm00001d017381_P001	Maize	cytosol, extracellular	27.56	33.44
Zm00001d051251_P003	Maize	cytosol	23.1	33.33
Zm00001d013022_P001	Maize	cytosol	27.82	33.12
Zm00001d051254_P001	Maize	cytosol	19.42	32.31
Zm00001d025924_P001	Maize	mitochondrion	28.61	31.87
Zm00001d007189_P003	Maize	cytosol, extracellular	12.6	28.4
Zm00001d051246_P001	Maize	peroxisome	27.03	10.67

Protein Annotations

EnsemblPlants:Zm00001d003173_P001	EnsemblPlants:Zm00001d003173_T001	EnsemblPlantsGene:Zm00001d003173	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43490	PANTHER:PTHR43490:SF37	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ProteinID:ONM16307.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000844F6CA	UniProt:A0A1D6E789	MapMan:50.1.1

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr2:+:34480343..34483632

Molecular Weight (calculated)

40478.2 Da

IEP (calculated)

9.909

GRAVY (calculated)

-0.125

Length

381 amino acids

Sequence
(BLAST)

001: MDYSGTKESP PAGAWWSRET VAVVTGANRG IGHALAARLA EHGLTVVLTA RDGERGEAAA APLLARGLAV VFRRLDVSDP ASVAEFAAWI RDALGGLDIL
101: VNNAAVSFNE IDTNSVEHAE AVLRTNFYGA KMLTEALLPL FRQSSATSRI LNVSSQLGLL NKKKNKDRLE TVRHLKWRIG QEGERPVAEG AAAGRGRADG
201: GGDRGDGVAV PGAGEGRTWG GQGWPKVWTD YSVSKLALNA YSRLLARRLQ ARGARVSVNC FCPGFTRTGM TKGWGKRTAE EAADVAARLA LLAPAELPTG
301: PSSSGARRSS TPSCDCDWIA TPTVVGSVCV RSVNAGVYIY SSVPLATLLR SQKRECRSAK VLSVEHSSFV TSPQCTMYLV V

Best Arabidopsis Sequence Match ( AT3G59710.1 )
(BLAST)

001: MDVVTLMYGL ITYIIYAYGI IHEWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF
101: GRNLGILDIL VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL
201: QDVKSGTWEK QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS
301: KL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.