Factsheet for Zm00001d017381_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07554	Sorghum	cytosol	88.53	90.26
TraesCS1B01G437500.1	Wheat	cytosol	69.11	69.55
TraesCS1D01G415900.1	Wheat	cytosol	69.11	69.55
HORVU1Hr1G089830.1	Barley	cytosol	67.83	68.27
TraesCS1A01G408800.1	Wheat	cytosol	68.47	63.42
Zm00001d051259_P001	Maize	cytosol	35.35	58.73
Zm00001d002845_P001	Maize	cytosol	10.83	58.62
Zm00001d051251_P003	Maize	cytosol	45.54	54.17
Zm00001d025922_P001	Maize	nucleus	52.23	52.73
Zm00001d002847_P001	Maize	cytosol	51.59	51.59
Zm00001d013022_P001	Maize	cytosol	52.55	51.56
Zm00001d025923_P001	Maize	cytosol	50.32	50.8
Zm00001d002848_P001	Maize	cytosol, plastid	50.96	50.16
Zm00001d025924_P001	Maize	mitochondrion	52.87	48.54
Zm00001d051254_P001	Maize	cytosol	33.44	45.85
Zm00001d003174_P001	Maize	extracellular, mitochondrion	35.99	38.44
Zm00001d025761_P002	Maize	mitochondrion	34.71	37.33
Zm00001d007189_P003	Maize	cytosol, extracellular	19.43	36.09
Zm00001d051041_P001	Maize	peroxisome	35.35	35.13
Zm00001d042250_P001	Maize	cytosol	35.35	34.26
Zm00001d003173_P001	Maize	cytosol	33.44	27.56
Zm00001d051246_P001	Maize	peroxisome	44.59	14.51

Protein Annotations

EMBL:BT040215	EMBL:BT040530	EMBL:EU955516	EnsemblPlants:Zm00001d017381_P001	EnsemblPlants:Zm00001d017381_T001	EnsemblPlantsGene:Zm00001d017381
EntrezGene:100281076	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490	PANTHER:PTHR43490:SF40
PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ProteinID:AQK73040.1	SEG:seg
SUPFAM:SSF51735	UniParc:UPI00017B7CBC	UniProt:B4FSX7	MapMan:50.1.1	:	:

Description

(+)-neomenthol dehydrogenase

Coordinates

chr5:+:193892301..193893913

Molecular Weight (calculated)

33868.1 Da

IEP (calculated)

5.257

GRAVY (calculated)

-0.196

Length

314 amino acids

Sequence
(BLAST)

001: MEGGAVPKPS EKRVALVTGG NRGMGFEICR QLASSGLTVV LTARSETRGA EAARELHGFG LPDVVSHQLD VTEPTSAARL ADFVRTKFGK LDVLVNNAGI
101: MGVTMEVGDD EAAVKEMMVG KDQNEIAEWL KQRTTQSAEQ AEECVRINYH GTKTVTEALL PLVQSSSSSS SGGRIVNVTS SFGLLRFFSG EELRQELSSV
201: DTLTTQRLDE LSALFLEDYR SGRLEPRGWP TDRVYAAYQV SKALVSAYAR VLARDNPALR VNCVHPGYVQ TEMNRNTGDL TAAEGARVSV AVALADQGGV
301: TGAYFDRTQI ASFV

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.