Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS1D01G415900.1 | Wheat | cytosol | 86.73 | 94.23 |
TraesCS1B01G437500.1 | Wheat | cytosol | 86.73 | 94.23 |
HORVU1Hr1G089830.1 | Barley | cytosol | 84.37 | 91.67 |
EES07554 | Sorghum | cytosol | 64.9 | 71.43 |
Zm00001d017381_P001 | Maize | cytosol, extracellular | 63.42 | 68.47 |
TraesCS2A01G516200.2 | Wheat | mitochondrion | 53.39 | 59.54 |
TraesCS2A01G370900.1 | Wheat | cytosol | 52.51 | 57.61 |
KRH40499 | Soybean | cytosol | 17.99 | 55.45 |
TraesCS2A01G371100.1 | Wheat | cytosol | 48.08 | 53.44 |
TraesCS7A01G114100.1 | Wheat | cytosol | 47.49 | 52.44 |
Bra032567.1-P | Field mustard | cytosol | 17.99 | 52.14 |
TraesCS2A01G371200.1 | Wheat | cytosol | 46.9 | 52.13 |
TraesCS2A01G371000.1 | Wheat | cytosol | 47.2 | 51.95 |
TraesCS2A01G371400.1 | Wheat | cytosol, plastid | 46.02 | 50.98 |
TraesCS7A01G111500.1 | Wheat | cytosol | 32.74 | 50.0 |
VIT_15s0046g03570.t01 | Wine grape | plastid | 43.36 | 49.49 |
VIT_15s0046g03550.t01 | Wine grape | cytosol | 42.48 | 48.32 |
Bra032573.1-P | Field mustard | cytosol | 18.88 | 47.76 |
KRH48198 | Soybean | cytosol | 40.41 | 47.4 |
VIT_06s0061g00670.t01 | Wine grape | plastid | 42.48 | 47.37 |
TraesCS2A01G371300.1 | Wheat | cytosol | 41.89 | 47.33 |
VIT_15s0046g03650.t01 | Wine grape | cytosol | 41.59 | 47.32 |
VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 41.3 | 47.14 |
VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 41.3 | 47.14 |
PGSC0003DMT400048179 | Potato | cytosol | 41.3 | 46.82 |
PGSC0003DMT400048181 | Potato | cytosol | 41.0 | 46.49 |
VIT_06s0061g00640.t01 | Wine grape | cytosol | 41.59 | 46.38 |
KRH48196 | Soybean | cytosol | 40.41 | 46.28 |
Solyc11g071460.1.1 | Tomato | cytosol | 40.71 | 46.15 |
PGSC0003DMT400047834 | Potato | cytosol | 40.71 | 46.15 |
VIT_15s0046g03600.t01 | Wine grape | cytosol | 40.41 | 45.97 |
TraesCS2A01G371500.1 | Wheat | plastid | 45.43 | 45.97 |
CDX71758 | Canola | cytosol | 40.12 | 45.95 |
KRH00696 | Soybean | mitochondrion | 39.82 | 45.92 |
KRH00691 | Soybean | cytosol | 34.22 | 45.49 |
CDY48937 | Canola | cytosol | 39.53 | 45.27 |
Bra007585.1-P | Field mustard | cytosol | 39.53 | 45.27 |
KRH40500 | Soybean | cytosol, nucleus | 38.94 | 44.9 |
CDX90062 | Canola | cytosol | 38.94 | 44.75 |
CDY15148 | Canola | cytosol | 38.94 | 44.75 |
KRH48194 | Soybean | cytosol | 39.23 | 44.63 |
KRH48206 | Soybean | cytosol | 40.12 | 44.59 |
KRH48202 | Soybean | cytosol | 39.23 | 44.48 |
Bra033230.1-P | Field mustard | cytosol | 38.64 | 44.41 |
TraesCS2A01G099800.1 | Wheat | cytosol | 41.0 | 44.27 |
KRH65113 | Soybean | cytosol | 38.94 | 44.15 |
PGSC0003DMT400000078 | Potato | cytosol | 38.94 | 44.0 |
PGSC0003DMT400000067 | Potato | golgi, peroxisome | 37.76 | 43.99 |
AT1G01800.1 | Thale cress | cytosol | 38.05 | 43.73 |
Solyc01g094220.2.1 | Tomato | cytosol | 38.35 | 43.33 |
AT2G24190.2 | Thale cress | cytosol | 38.35 | 43.19 |
KRH65114 | Soybean | cytosol | 36.87 | 42.52 |
Bra014448.1-P | Field mustard | cytosol | 37.17 | 42.42 |
CDX89104 | Canola | cytosol | 34.51 | 42.39 |
Solyc01g094210.2.1 | Tomato | cytosol | 36.58 | 41.75 |
PGSC0003DMT400048175 | Potato | cytosol, peroxisome, plastid | 15.63 | 41.73 |
KRH65115 | Soybean | cytosol | 39.82 | 41.54 |
PGSC0003DMT400088659 | Potato | cytosol | 14.45 | 41.53 |
CDY56927 | Canola | endoplasmic reticulum, golgi | 36.87 | 40.85 |
TraesCS2A01G353500.1 | Wheat | peroxisome | 34.81 | 40.41 |
Solyc01g094260.2.1 | Tomato | cytosol | 37.76 | 40.13 |
Solyc01g099560.2.1 | Tomato | cytosol | 20.94 | 40.11 |
VIT_06s0009g01450.t01 | Wine grape | plastid | 29.79 | 40.08 |
PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 35.69 | 39.54 |
Solyc01g094250.2.1 | Tomato | cytosol | 37.17 | 39.5 |
AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 38.05 | 39.45 |
PGSC0003DMT400026580 | Potato | cytosol | 35.99 | 39.35 |
Solyc01g094240.2.1 | Tomato | cytosol | 36.87 | 39.31 |
VIT_02s0025g04510.t01 | Wine grape | cytosol | 23.01 | 39.2 |
Solyc01g094270.2.1 | Tomato | cytosol, plastid | 36.28 | 39.05 |
Solyc10g017570.2.1 | Tomato | cytosol | 35.69 | 39.03 |
KRH17659 | Soybean | cytosol | 11.21 | 38.78 |
TraesCS6A01G218000.1 | Wheat | peroxisome | 33.04 | 38.36 |
TraesCS2A01G100000.2 | Wheat | plastid | 42.18 | 38.03 |
Solyc11g042710.1.1 | Tomato | cytosol | 17.7 | 37.97 |
TraesCS3A01G444300.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 32.15 | 33.85 |
KRH40504 | Soybean | endoplasmic reticulum | 38.64 | 33.59 |
VIT_15s0046g03530.t01 | Wine grape | cytosol | 19.17 | 19.01 |
VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 41.3 | 18.84 |
Protein Annotations
EnsemblPlants:TraesCS1A01G408800.1 | EnsemblPlantsGene:TraesCS1A01G408800 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
PANTHER:PTHR43490:SF13 | PFAM:PF00106 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg |
SUPFAM:SSF51735 | MapMan:50.1.1 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:570446380..570448396
Molecular Weight (calculated)
36377.2 Da
IEP (calculated)
5.450
GRAVY (calculated)
-0.196
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSISGPSE KRVAVVTGGN RGMGLEICRQ LAAHGLTVVL TARDEKRGTE AAEKLREEGL PDVMFHQLEI SEPASAAHLA ASIKDKFGKL DILPPTLVPR
101: SRSSFPPYRK HGNYAHTAPQ VNNAGVLGVT TDVGDPATLQ ETLAGMDGME RAEWLRQRTT QTAQDAEDCL RINYHGNKTV TEALLPLLRS SSDGRIVNVT
201: SAWGLLRYFS GDELRRELDD VANLTTQRLD EMSGLFLEDL GTGNGALERR GWPADPVYAA YMASKALVCA YTRVIAREEG AALRVNCVHP GYVVTGMNDY
301: TGILTAAEGA AAAVVVALAE KGGVTGAYFD RTELGASFV
101: SRSSFPPYRK HGNYAHTAPQ VNNAGVLGVT TDVGDPATLQ ETLAGMDGME RAEWLRQRTT QTAQDAEDCL RINYHGNKTV TEALLPLLRS SSDGRIVNVT
201: SAWGLLRYFS GDELRRELDD VANLTTQRLD EMSGLFLEDL GTGNGALERR GWPADPVYAA YMASKALVCA YTRVIAREEG AALRVNCVHP GYVVTGMNDY
301: TGILTAAEGA AAAVVVALAE KGGVTGAYFD RTELGASFV
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.