Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G544800.1 | Wheat | cytosol | 92.11 | 90.91 |
| TraesCS2D01G517700.1 | Wheat | cytosol | 91.12 | 89.94 |
| HORVU2Hr1G114340.4 | Barley | endoplasmic reticulum, golgi | 90.79 | 75.62 |
| EES07552 | Sorghum | cytosol | 66.12 | 65.26 |
| EES07551 | Sorghum | cytosol | 63.16 | 63.37 |
| KXG31133 | Sorghum | cytosol | 59.21 | 62.07 |
| EES07553 | Sorghum | cytosol | 62.5 | 61.49 |
| Zm00001d051259_P001 | Maize | cytosol | 36.51 | 58.73 |
| TraesCS2A01G370900.1 | Wheat | cytosol | 58.88 | 57.93 |
| Zm00001d051251_P003 | Maize | cytosol | 49.01 | 56.44 |
| TraesCS2A01G371000.1 | Wheat | cytosol | 56.25 | 55.52 |
| TraesCS7A01G114100.1 | Wheat | cytosol | 55.59 | 55.05 |
| TraesCS2A01G371100.1 | Wheat | cytosol | 54.93 | 54.75 |
| TraesCS2A01G371400.1 | Wheat | cytosol, plastid | 54.61 | 54.25 |
| OQU85768 | Sorghum | cytosol | 63.82 | 54.04 |
| TraesCS2A01G371300.1 | Wheat | cytosol | 53.29 | 54.0 |
| TraesCS2A01G371200.1 | Wheat | cytosol | 53.62 | 53.44 |
| TraesCS1A01G408800.1 | Wheat | cytosol | 59.54 | 53.39 |
| TraesCS7A01G111500.1 | Wheat | cytosol | 38.49 | 52.7 |
| VIT_06s0061g00670.t01 | Wine grape | plastid | 52.63 | 52.63 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 50.66 | 51.85 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 50.66 | 51.85 |
| KRH40499 | Soybean | cytosol | 18.75 | 51.82 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 50.66 | 51.68 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 50.66 | 51.68 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 50.66 | 51.68 |
| TraesCS2A01G371500.1 | Wheat | plastid | 56.91 | 51.64 |
| KRH00691 | Soybean | cytosol | 42.76 | 50.98 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 49.67 | 50.84 |
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 50.66 | 50.66 |
| KRH48198 | Soybean | cytosol | 48.03 | 50.52 |
| Solyc11g071460.1.1 | Tomato | cytosol | 49.34 | 50.17 |
| PGSC0003DMT400048179 | Potato | cytosol | 49.34 | 50.17 |
| KRH00696 | Soybean | mitochondrion | 48.36 | 50.0 |
| PGSC0003DMT400048181 | Potato | cytosol | 49.01 | 49.83 |
| KRH48196 | Soybean | cytosol | 48.36 | 49.66 |
| PGSC0003DMT400047834 | Potato | cytosol | 48.36 | 49.16 |
| KRH40500 | Soybean | cytosol, nucleus | 47.37 | 48.98 |
| Bra032567.1-P | Field mustard | cytosol | 18.75 | 48.72 |
| PGSC0003DMT400000078 | Potato | cytosol | 48.03 | 48.67 |
| KRH48206 | Soybean | cytosol | 48.68 | 48.52 |
| Solyc01g094220.2.1 | Tomato | cytosol | 47.7 | 48.33 |
| PGSC0003DMT400000067 | Potato | golgi, peroxisome | 46.05 | 48.11 |
| Zm00001d051254_P001 | Maize | cytosol | 36.18 | 48.03 |
| KRH65113 | Soybean | cytosol | 47.04 | 47.83 |
| CDX71758 | Canola | cytosol | 46.38 | 47.64 |
| Solyc01g099560.2.1 | Tomato | cytosol | 27.63 | 47.46 |
| TraesCS2A01G099800.1 | Wheat | cytosol | 49.01 | 47.45 |
| CDY48937 | Canola | cytosol | 46.05 | 47.3 |
| Bra007585.1-P | Field mustard | cytosol | 46.05 | 47.3 |
| KRH65114 | Soybean | cytosol | 45.39 | 46.94 |
| KRH48202 | Soybean | cytosol | 46.05 | 46.82 |
| Bra014448.1-P | Field mustard | cytosol | 45.72 | 46.8 |
| AT1G01800.1 | Thale cress | cytosol | 45.39 | 46.78 |
| KRH48194 | Soybean | cytosol | 45.72 | 46.64 |
| Bra033230.1-P | Field mustard | cytosol | 45.07 | 46.44 |
| CDY15148 | Canola | cytosol | 44.74 | 46.1 |
| CDX90062 | Canola | cytosol | 44.74 | 46.1 |
| CDX89104 | Canola | cytosol | 41.78 | 46.01 |
| AT2G24190.2 | Thale cress | cytosol | 45.39 | 45.85 |
| Solyc01g094210.2.1 | Tomato | cytosol | 44.74 | 45.79 |
| Bra032573.1-P | Field mustard | cytosol | 20.07 | 45.52 |
| CDY56927 | Canola | endoplasmic reticulum, golgi | 45.39 | 45.1 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 28.95 | 44.22 |
| PGSC0003DMT400048175 | Potato | cytosol, peroxisome, plastid | 18.42 | 44.09 |
| KRH65115 | Soybean | cytosol | 47.04 | 44.0 |
| AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 47.04 | 43.73 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 36.18 | 43.65 |
| PGSC0003DMT400088659 | Potato | cytosol | 16.78 | 43.22 |
| PGSC0003DMT400026580 | Potato | cytosol | 43.42 | 42.58 |
| Solyc10g017570.2.1 | Tomato | cytosol | 42.76 | 41.94 |
| KRH17659 | Soybean | cytosol | 13.49 | 41.84 |
| PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 41.78 | 41.5 |
| TraesCS2A01G353500.1 | Wheat | peroxisome | 39.8 | 41.44 |
| Solyc01g094240.2.1 | Tomato | cytosol | 42.43 | 40.57 |
| Solyc11g042710.1.1 | Tomato | cytosol | 21.05 | 40.51 |
| Solyc01g094250.2.1 | Tomato | cytosol | 42.43 | 40.44 |
| Solyc01g094270.2.1 | Tomato | cytosol, plastid | 41.78 | 40.32 |
| Solyc01g094260.2.1 | Tomato | cytosol | 42.11 | 40.13 |
| TraesCS6A01G218000.1 | Wheat | peroxisome | 38.16 | 39.73 |
| TraesCS2A01G100000.2 | Wheat | plastid | 47.7 | 38.56 |
| KRH40504 | Soybean | endoplasmic reticulum | 48.03 | 37.44 |
| TraesCS3A01G444300.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 34.21 | 32.3 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 24.01 | 21.34 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 51.32 | 21.0 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G516200.2 | EnsemblPlantsGene:TraesCS2A01G516200 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF40 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| MapMan:50.1.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:740011324..740013179
Molecular Weight (calculated)
33120.4 Da
IEP (calculated)
5.988
GRAVY (calculated)
-0.187
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGSSCRRV ALVTGANRGI GLEVCRQLAS GSATVVLTAR DEKRGAAAVD ALRELGLSDV VFCQLDVGEP SSAARLADFL RDRFGRLDIL VNNAGVSGVR
101: MDVGDPAALH QVRTSMSAAE RLEWFNQRTA EPFEEAEECL RTNYHGTKNV TEALLPLLLS SSDARVVNVS SSYGLLRYFS GEELKHELDD IDNLSAERLD
201: ELSGLFLKDF KNGRLDHRGW PVGGFSAYKV SKALINAYTR ILAKKHTSMR LNCLDPGYVK TDINFHTGVL TVEEGARGPV MLALMPKEGP TGSYFNGTEQ
301: AAFM
101: MDVGDPAALH QVRTSMSAAE RLEWFNQRTA EPFEEAEECL RTNYHGTKNV TEALLPLLLS SSDARVVNVS SSYGLLRYFS GEELKHELDD IDNLSAERLD
201: ELSGLFLKDF KNGRLDHRGW PVGGFSAYKV SKALINAYTR ILAKKHTSMR LNCLDPGYVK TDINFHTGVL TVEEGARGPV MLALMPKEGP TGSYFNGTEQ
301: AAFM
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.