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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07551 Sorghum cytosol 74.09 87.79
KXG31133 Sorghum cytosol 67.69 83.79
Zm00001d051259_P001 Maize cytosol 41.23 78.31
Zm00001d051251_P003 Maize cytosol 52.65 71.59
EES07553 Sorghum cytosol 58.77 68.28
EES07552 Sorghum cytosol 57.94 67.53
TraesCS2A01G516200.2 Wheat mitochondrion 54.04 63.82
TraesCS2D01G517700.1 Wheat cytosol 54.32 63.31
TraesCS2B01G544800.1 Wheat cytosol 54.04 62.99
Zm00001d051254_P001 Maize cytosol 39.83 62.45
KRH40499 Soybean cytosol 18.38 60.0
EES07554 Sorghum cytosol 50.14 58.44
EES11171 Sorghum cytosol 48.75 56.27
OQU82017 Sorghum extracellular 25.63 55.76
EES11173 Sorghum cytosol 47.63 54.98
EES11175 Sorghum cytosol, plastid 45.13 54.18
KXG26779 Sorghum cytosol 46.8 54.02
EES11167 Sorghum cytosol 46.52 53.87
EES11174 Sorghum cytosol 46.24 53.55
HORVU2Hr1G114340.4 Barley endoplasmic reticulum, golgi 54.04 53.15
EER93229 Sorghum cytosol 46.24 52.87
VIT_15s0046g03550.t01 Wine grape cytosol 43.45 52.35
Bra032567.1-P Field mustard cytosol 16.99 52.14
KRH00696 Soybean mitochondrion 42.34 51.7
VIT_15s0046g03580.t01 Wine grape cytosol, peroxisome, plastid 42.62 51.52
VIT_15s0046g03590.t01 Wine grape cytosol, peroxisome, plastid 42.62 51.52
VIT_15s0046g03650.t01 Wine grape cytosol 42.34 51.01
VIT_15s0046g03600.t01 Wine grape cytosol 42.34 51.01
VIT_15s0046g03570.t01 Wine grape plastid 42.06 50.84
VIT_06s0061g00640.t01 Wine grape cytosol 42.9 50.66
EES09734 Sorghum cytosol 43.73 50.48
KRH48196 Soybean cytosol 41.5 50.34
VIT_06s0061g00670.t01 Wine grape plastid 42.62 50.33
KRH48198 Soybean cytosol 40.39 50.17
KXG31187 Sorghum mitochondrion 40.95 49.49
KRH00691 Soybean cytosol 34.82 49.02
EES17690 Sorghum cytosol 22.56 48.5
KRH40500 Soybean cytosol, nucleus 39.55 48.3
KRH17659 Soybean cytosol 13.09 47.96
KRH65113 Soybean cytosol 39.83 47.83
Bra032573.1-P Field mustard cytosol 17.83 47.76
Solyc01g094220.2.1 Tomato cytosol 39.83 47.67
PGSC0003DMT400000078 Potato cytosol 39.83 47.67
Solyc11g071460.1.1 Tomato cytosol 39.55 47.49
KRH48202 Soybean cytosol 39.55 47.49
PGSC0003DMT400048181 Potato cytosol 39.55 47.49
PGSC0003DMT400048179 Potato cytosol 39.55 47.49
PGSC0003DMT400000067 Potato golgi, peroxisome 38.44 47.42
KRH48194 Soybean cytosol 39.28 47.32
KRH48206 Soybean cytosol 40.11 47.21
PGSC0003DMT400047834 Potato cytosol 38.72 46.49
Solyc01g094210.2.1 Tomato cytosol 37.33 45.12
CDX71758 Canola cytosol 37.05 44.93
KRH65115 Soybean cytosol 40.67 44.92
PGSC0003DMT400048175 Potato cytosol, peroxisome, plastid 15.88 44.88
AT1G01800.1 Thale cress cytosol 36.77 44.75
Bra007585.1-P Field mustard cytosol 36.77 44.59
CDY48937 Canola cytosol 36.77 44.59
KRH65114 Soybean cytosol 35.93 43.88
AT2G24190.2 Thale cress cytosol 36.77 43.85
Bra014448.1-P Field mustard cytosol 36.21 43.77
Bra033230.1-P Field mustard cytosol 35.93 43.73
CDX90062 Canola cytosol 35.93 43.73
CDY15148 Canola cytosol 35.93 43.73
Solyc01g099560.2.1 Tomato cytosol 21.45 43.5
VIT_02s0025g04510.t01 Wine grape cytosol 23.96 43.22
CDX89104 Canola cytosol 32.59 42.39
PGSC0003DMT400026580 Potato cytosol 36.49 42.26
CDY56927 Canola endoplasmic reticulum, golgi 35.93 42.16
Solyc10g017570.2.1 Tomato cytosol 35.65 41.29
AT3G61220.3 Thale cress endoplasmic reticulum, vacuole 37.6 41.28
PGSC0003DMT400000080 Potato cytosol, mitochondrion, plastid 34.82 40.85
OQU81866 Sorghum cytosol, peroxisome, plastid 32.59 40.34
Solyc01g094270.2.1 Tomato cytosol, plastid 35.38 40.32
Solyc01g094240.2.1 Tomato cytosol 35.65 40.25
Solyc01g094260.2.1 Tomato cytosol 35.65 40.13
EER97757 Sorghum cytosol 36.77 39.88
VIT_06s0009g01450.t01 Wine grape plastid 27.86 39.68
Solyc01g094250.2.1 Tomato cytosol 35.1 39.5
Solyc11g042710.1.1 Tomato cytosol 17.27 39.24
PGSC0003DMT400088659 Potato cytosol 12.81 38.98
KRH40504 Soybean endoplasmic reticulum 39.0 35.9
KXG36979 Sorghum plastid 37.33 35.83
EES07125 Sorghum cytosol, peroxisome, plastid 30.64 35.48
EES04148 Sorghum cytosol 27.86 30.86
VIT_15s0046g03530.t01 Wine grape cytosol 19.5 20.47
VIT_06s0061g00620.t01 Wine grape mitochondrion, plastid 42.34 20.46
Protein Annotations
EnsemblPlants:OQU85768EnsemblPlantsGene:SORBI_3004G304000EntrezGene:8078892Gene3D:3.40.50.720GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famPANTHER:PTHR43490PANTHER:PTHR43490:SF40PFAM:PF00106
PRINTS:PR00080PRINTS:PR00081ProteinID:OQU85768ProteinID:OQU85768.1SEG:segSUPFAM:SSF51735
TMHMM:TMhelixUniParc:UPI000B8BAD00UniProt:A0A1Z5RPZ5MapMan:50.1.1::
Description
hypothetical protein
Coordinates
chr4:-:64303666..64306376
Molecular Weight (calculated)
39590.8 Da
IEP (calculated)
6.113
GRAVY (calculated)
0.026
Length
359 amino acids
Sequence
(BLAST)
001: MEGRTGNQSE KQVAVVTGGN RGIGLEICKQ LASNGVTVVL TARDEKRGAE AVSTLGLSNV VFHELDVSDP SSAARLADFI KEKFGKLDIL VNNAGITGTT
101: WSVGDPEIFR QKLAGMDFME RIETIHKHIT EPYEEAEKCL RTNYHGIKAV TKALLPLLQS SSHGRIVNMS SDYGLLRFFS GDELKAELNN IDSLSEQRLD
201: ELSELFLRDF DDGLLEARGW PTGGFSAYKV SKALVNAYSR ILAKDHPSLC INCVHPGYVQ TDMNFHAGDL PVEEGVRGVL MMAMAPKGGV TGSFKSEFAV
301: FPVRAKEKLL LPLWCSMNKQ SSLISLVSLI FFIFSFLFLE SPDLISLVKF GGFYFLLIY
Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.