CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

nucleus 1
peroxisome 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d051041_P001	Maize	peroxisome	92.58	90.82
Os02t0607700-01	Rice	cytosol, peroxisome, plastid	80.97	84.23
TraesCS6D01G200400.1	Wheat	peroxisome	78.71	83.56
TraesCS6B01G247400.1	Wheat	peroxisome	78.71	83.56
TraesCS6A01G218000.1	Wheat	peroxisome	78.71	83.56
HORVU6Hr1G055660.3	Barley	cytosol, peroxisome, plastid	78.71	83.56
OQU81866	Sorghum	cytosol, peroxisome, plastid	72.58	77.59
GSMUA_Achr8P28970_001	Banana	peroxisome	63.23	66.44
VIT_05s0094g00770.t01	Wine grape	cytosol	56.13	58.59
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	22.58	56.91
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	55.16	56.44
KRH50192	Soybean	cytosol	54.84	56.11
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	52.26	54.55
CDY05983	Canola	cytosol, peroxisome, plastid	50.97	54.11
Bra007472.1-P	Field mustard	cytosol, peroxisome, plastid	50.65	53.77
CDX67809	Canola	peroxisome	50.97	53.56
CDX71880	Canola	peroxisome	50.32	53.42
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	52.26	50.47
EES04148	Sorghum	cytosol	42.58	40.74
EES11173	Sorghum	cytosol	37.74	37.62
OQU82017	Sorghum	extracellular	20.0	37.58
KXG31187	Sorghum	mitochondrion	35.16	36.7
EES11175	Sorghum	cytosol, plastid	35.16	36.45
EES07553	Sorghum	cytosol	36.13	36.25
EES07551	Sorghum	cytosol	35.16	35.97
EES07552	Sorghum	cytosol	35.16	35.39
KXG31133	Sorghum	cytosol	32.9	35.17
EES11174	Sorghum	cytosol	35.16	35.16
EER93229	Sorghum	cytosol	35.48	35.03
EES11167	Sorghum	cytosol	34.84	34.84
EES07554	Sorghum	cytosol	34.52	34.74
EES17690	Sorghum	cytosol	18.71	34.73
EES11171	Sorghum	cytosol	34.84	34.73
KXG26779	Sorghum	cytosol	34.52	34.41
EES09734	Sorghum	cytosol	33.55	33.44
EER97757	Sorghum	cytosol	34.52	32.33
OQU85768	Sorghum	cytosol	35.48	30.64
KXG36979	Sorghum	plastid	35.81	29.68

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EntrezGene:8056507	UniProt:C5XX91	EnsemblPlants:EES07125	ProteinID:EES07125
ProteinID:EES07125.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
PANTHER:PTHR43490	PANTHER:PTHR43490:SF37	InterPro:SDR_fam	EnsemblPlantsGene:SORBI_3004G209400	SUPFAM:SSF51735	UniParc:UPI0001A85E52
RefSeq:XP_002454149.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:55904052..55909617

Molecular Weight (calculated)

33473.0 Da

IEP (calculated)

9.561

GRAVY (calculated)

-0.124

Length

310 amino acids

Sequence
(BLAST)

001: MSSSSSSMDC VAASKDKEET PPLNSRAAAW WTGETVAVVT GANRGIGHAL AARLAEQGLC VVVTARDEAR GEAAAAALRA RGPLRGAVRF RRLDVADPAS
101: VAAFASWVRD ELGGLDILVN NAGVSFNEMD TNSVEHAETV LRTNFYGAKM LTEALLPLFR RSPTTSRILN ISSQLGLLNK VKDPQLRRML LDEAALTEGD
201: IEGMASRFLA QVADGTWRGR GWPEVWTDYA VSKLALNAYS RLLASRLAGR GVSVNCFCPG FTRTDMTRGL GKRTAEEAGR VAAGLALLPP HHLPTGEFFK
301: WRTPQLYSKL

Best Arabidopsis Sequence Match ( AT3G59710.3 )
(BLAST)

001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [cytosol,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.