Factsheet for Bra007472.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
plastid 3
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05983	Canola	cytosol, peroxisome, plastid	99.32	99.32
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	79.11	71.96
VIT_05s0094g00770.t01	Wine grape	cytosol	59.59	58.59
TraesCS2D01G350600.1	Wheat	peroxisome	57.88	57.88
HORVU2Hr1G085650.1	Barley	cytosol, peroxisome	46.58	57.63
TraesCS2A01G353500.1	Wheat	peroxisome	57.53	57.53
TraesCS2B01G371400.1	Wheat	peroxisome	56.85	56.85
KRH50192	Soybean	cytosol	58.9	56.77
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	58.9	56.77
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	23.63	56.1
GSMUA_Achr8P28970_001	Banana	peroxisome	55.82	55.25
HORVU6Hr1G055660.3	Barley	cytosol, peroxisome, plastid	54.79	54.79
Zm00001d025761_P002	Maize	mitochondrion	54.79	54.79
OQU81866	Sorghum	cytosol, peroxisome, plastid	54.11	54.48
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	55.14	54.21
TraesCS6B01G247400.1	Wheat	peroxisome	54.11	54.11
Zm00001d003174_P001	Maize	extracellular, mitochondrion	54.45	54.08
Os02t0607700-01	Rice	cytosol, peroxisome, plastid	54.79	53.69
TraesCS6D01G200400.1	Wheat	peroxisome	53.42	53.42
TraesCS6A01G218000.1	Wheat	peroxisome	53.42	53.42
EES07125	Sorghum	cytosol, peroxisome, plastid	53.77	50.65
Zm00001d051041_P001	Maize	peroxisome	54.11	50.0
Os04t0496000-01	Rice	cytosol, peroxisome	23.97	49.3
Bra022746.1-P	Field mustard	cytosol	45.89	43.23
Bra032567.1-P	Field mustard	cytosol	16.78	41.88
Bra019617.1-P	Field mustard	cytosol	44.52	41.14
Os04t0496150-00	Rice	cytosol	21.58	39.62
Zm00001d003173_P001	Maize	cytosol	51.37	39.37
Bra032573.1-P	Field mustard	cytosol	17.81	38.81
Bra033230.1-P	Field mustard	cytosol	37.33	36.95
Bra014448.1-P	Field mustard	cytosol	36.3	35.69
Bra007585.1-P	Field mustard	cytosol	35.27	34.8

Protein Annotations

EnsemblPlants:Bra007472.1	EnsemblPlants:Bra007472.1-P	EnsemblPlantsGene:Bra007472	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43490	PANTHER:PTHR43490:SF8	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
SUPFAM:SSF51735	UniParc:UPI0002542F37	UniProt:M4CTC9	MapMan:50.1.1	:	:

Description

AT3G59710 (E=8e-131) | short-chain dehydrogenase/reductase (SDR) family protein

Coordinates

chrA09:-:29382045..29383456

Molecular Weight (calculated)

32418.9 Da

IEP (calculated)

9.593

GRAVY (calculated)

-0.087

Length

292 amino acids

Sequence
(BLAST)

001: MDHLVYPLPP TARWWSRETT AIVTGANKGI GFEVVKKLLE LGLTVVLTAR NAKNGSLAAD SLRRAGFQNV QFYCLDVSEP SSIAAFVSWF RHNFGVLDIL
101: VNNAAVSFNV VGDNSIREPE TIIKTNFYGA KLLTEALLPL FRHSVSASRI LNISSRLGSL NKLRNPTVRQ TLESEELTNE QIDATVTQFL EDVSNGTWEK
201: QGWPENWSDY AVSKMALNAY SRVLARRYNG KKLSVNCFCP GFTRTSMTGG QGTHTAEDVA ATIATLVLLP PEKLTSGKFF MFLEHKKIIS RL

Best Arabidopsis Sequence Match ( AT3G59710.3 )
(BLAST)

001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.