Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
- peroxisome 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400022011 | Potato | cytosol, peroxisome, plastid | 50.7 | 58.54 |
| Os02t0607700-01 | Rice | cytosol, peroxisome, plastid | 75.35 | 35.91 |
| GSMUA_Achr8P28970_001 | Banana | peroxisome | 71.13 | 34.24 |
| VIT_05s0094g00770.t01 | Wine grape | cytosol | 58.45 | 27.95 |
| Solyc03g059190.2.1 | Tomato | cytosol, peroxisome, plastid | 57.04 | 27.27 |
| KRH50192 | Soybean | cytosol | 52.82 | 24.75 |
| KRH71272 | Soybean | cytosol, mitochondrion, peroxisome | 51.41 | 24.09 |
| CDX67809 | Canola | peroxisome | 50.0 | 24.07 |
| Bra007472.1-P | Field mustard | cytosol, peroxisome, plastid | 49.3 | 23.97 |
| CDY05983 | Canola | cytosol, peroxisome, plastid | 49.3 | 23.97 |
| AT3G59710.2 | Thale cress | cytosol, peroxisome, plastid | 52.82 | 23.36 |
| CDX71880 | Canola | peroxisome | 47.18 | 22.95 |
| Os01t0929500-01 | Rice | cytosol | 40.14 | 17.27 |
| Os04t0531900-01 | Rice | cytosol, plastid | 36.62 | 16.94 |
| Os04t0532100-01 | Rice | cytosol | 35.92 | 16.5 |
| Os04t0532400-01 | Rice | cytosol | 34.51 | 15.96 |
| Os07t0685800-01 | Rice | plastid | 30.99 | 11.8 |
| Os02t0640600-00 | Rice | mitochondrion | 28.87 | 11.02 |
| Os04t0496150-00 | Rice | cytosol | 11.27 | 10.06 |
| Os04t0531700-01 | Rice | mitochondrion | 3.52 | 4.59 |
| Os04t0531750-00 | Rice | mitochondrion | 5.63 | 2.42 |
Protein Annotations
| EnsemblPlants:Os04t0496000-01 | EnsemblPlantsGene:Os04g0496000 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF37 | PFAM:PF00106 | PRINTS:PR00081 | ProteinID:BAF15112.1 | ProteinID:BAS89889.1 | SUPFAM:SSF51735 |
| UniParc:UPI0000DD915F | UniProt:Q0JC25 | MapMan:50.1.1 | : | : | : |
Description
Glucose/ribitol dehydrogenase family protein. (Os04t0496000-01)
Coordinates
chr4:-:24810332..24811141
Molecular Weight (calculated)
16068.4 Da
IEP (calculated)
9.318
GRAVY (calculated)
-0.317
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: WIGCVFVLQK VSDPELKRLL QDEERLTEAE VEGMASRFLA QVKDGTWRGQ GWPKVWTDYS VSKLALNAYA RVLARRLQAR GDRVSVNCFC PGFTRTDMTR
101: GWGKRTAEEA AEIGARLALL PPGELPTGTF FKWCTPQLYS KL
101: GWGKRTAEEA AEIGARLALL PPGELPTGTF FKWCTPQLYS KL
001: MDVVTLMYGL ITYIIYAYGI IHEWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF
101: GRNLGILDIL VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL
201: QDVKSGTWEK QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS
301: KL
101: GRNLGILDIL VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL
201: QDVKSGTWEK QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS
301: KL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.