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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 3
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX71880 Canola peroxisome 85.76 86.64
CDY05983 Canola cytosol, peroxisome, plastid 85.42 86.3
AT3G59710.2 Thale cress cytosol, peroxisome, plastid 80.0 73.52
VIT_05s0094g00770.t01 Wine grape cytosol 59.32 58.92
TraesCS2D01G350600.1 Wheat peroxisome 57.63 58.22
TraesCS2A01G353500.1 Wheat peroxisome 56.95 57.53
HORVU2Hr1G085650.1 Barley cytosol, peroxisome 45.76 57.2
TraesCS2B01G371400.1 Wheat peroxisome 56.27 56.85
GSMUA_Achr8P28970_001 Banana peroxisome 55.59 55.59
HORVU6Hr1G055660.3 Barley cytosol, peroxisome, plastid 54.92 55.48
KRH71272 Soybean cytosol, mitochondrion, peroxisome 56.95 55.45
KRH50192 Soybean cytosol 56.61 55.12
TraesCS6B01G247400.1 Wheat peroxisome 54.24 54.79
Zm00001d025761_P002 Maize mitochondrion 53.9 54.45
Solyc03g059190.2.1 Tomato cytosol, peroxisome, plastid 54.58 54.21
OQU81866 Sorghum cytosol, peroxisome, plastid 53.22 54.14
TraesCS6A01G218000.1 Wheat peroxisome 53.56 54.11
TraesCS6D01G200400.1 Wheat peroxisome 53.56 54.11
Os02t0607700-01 Rice cytosol, peroxisome, plastid 54.58 54.03
Zm00001d003174_P001 Maize extracellular, mitochondrion 53.56 53.74
PGSC0003DMT400022011 Potato cytosol, peroxisome, plastid 22.03 52.85
EES07125 Sorghum cytosol, peroxisome, plastid 53.56 50.97
Zm00001d051041_P001 Maize peroxisome 54.58 50.95
Os04t0496000-01 Rice cytosol, peroxisome 24.07 50.0
CDY45793 Canola cytosol 44.75 42.58
CDX84895 Canola cytosol 44.75 42.58
CDY53157 Canola cytosol 44.75 41.77
CDY00233 Canola cytosol 44.75 41.77
Os04t0496150-00 Rice cytosol 21.36 39.62
Zm00001d003173_P001 Maize cytosol 50.17 38.85
CDY15148 Canola cytosol 37.63 37.63
CDX90062 Canola cytosol 36.95 36.95
CDY48937 Canola cytosol 36.27 36.15
CDX89104 Canola cytosol 32.88 35.14
CDY56927 Canola endoplasmic reticulum, golgi 36.27 34.97
CDX71758 Canola cytosol 34.92 34.8
Protein Annotations
EnsemblPlants:CDX67809EnsemblPlantsGene:GSBRNA2T00099005001Gene3D:3.40.50.720GO:A0A078BVN1InterPro:NAD(P)-bd_dom_sfInterPro:SDR_fam
PANTHER:PTHR43490PANTHER:PTHR43490:SF8PFAM:PF00106PFAM:PF13561PRINTS:PR00080PRINTS:PR00081
ProteinID:CDX67809ProteinID:CDX67809.1SEG:segSUPFAM:SSF51735UniParc:UPI0004EE6C0DMapMan:50.1.1
Description
BnaA07g18490D
Coordinates
chrLK031787:-:2340951..2343759
Molecular Weight (calculated)
32648.3 Da
IEP (calculated)
9.129
GRAVY (calculated)
-0.053
Length
295 amino acids
Sequence
(BLAST)
001: MDHLISLLSP IPPSDRWWSE ETTAVVTGAN KGIGFEVVKK LLKLGLTVVL TARNAENGSI ASDSLRRAGF QNVHFFCLDV SDPSSISAFV SWFRLNFGIL
101: DILVNNAAVS FNAVGENSIR EPETIIKTNY YGAKLLTEAL LPLFRRSVSV GRILNISSRL GALNKLRNPS LRQTLESEKL TYEQIDATVT QFLEDVSRGT
201: YEKNGWPENW SDYAVSKMVL NAYSRVLARR YDGKKLSVNC FCPGFTRTSM TGGQGNHTAE EAAATVAMLV LLPPEKLTSG KFFMCVEPNK IISRL
Best Arabidopsis Sequence Match ( AT3G59710.3 )
(BLAST)
001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [peroxisome,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.