Factsheet for HORVU6Hr1G055660.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G247400.1	Wheat	peroxisome	96.92	96.92
TraesCS6A01G218000.1	Wheat	peroxisome	96.58	96.58
TraesCS6D01G200400.1	Wheat	peroxisome	95.21	95.21
Os02t0607700-01	Rice	cytosol, peroxisome, plastid	89.04	87.25
EES07125	Sorghum	cytosol, peroxisome, plastid	83.56	78.71
HORVU2Hr1G085650.1	Barley	cytosol, peroxisome	62.67	77.54
Zm00001d051041_P001	Maize	peroxisome	82.53	76.27
GSMUA_Achr8P28970_001	Banana	peroxisome	66.44	65.76
VIT_05s0094g00770.t01	Wine grape	cytosol	59.93	58.92
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	60.27	58.09
KRH50192	Soybean	cytosol	59.25	57.1
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	23.63	56.1
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	56.51	55.56
CDY05983	Canola	cytosol, peroxisome, plastid	55.48	55.48
CDX67809	Canola	peroxisome	55.48	54.92
Bra007472.1-P	Field mustard	cytosol, peroxisome, plastid	54.79	54.79
CDX71880	Canola	peroxisome	54.79	54.79
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	56.85	51.71
HORVU3Hr1G096690.3	Barley	cytosol	46.23	41.93
HORVU7Hr1G024270.5	Barley	cytosol	38.7	36.81
HORVU5Hr1G031560.1	Barley	cytosol	15.75	36.22
HORVU1Hr1G064390.1	Barley	cytosol	37.33	35.16
HORVU2Hr1G091430.7	Barley	cytosol	37.67	35.14
HORVU1Hr1G089830.1	Barley	cytosol	36.64	34.29
HORVU2Hr1G091460.1	Barley	cytosol, mitochondrion, plastid	36.64	34.08
HORVU2Hr1G114340.4	Barley	endoplasmic reticulum, golgi	41.44	33.15
HORVU2Hr1G091440.3	Barley	mitochondrion	40.41	33.15
HORVU2Hr1G017120.1	Barley	plastid	36.99	29.43
HORVU5Hr1G031520.2	Barley	cytosol	27.4	28.57

Protein Annotations

EMBL:AK375906	EnsemblPlants:HORVU6Hr1G055660.3	EnsemblPlantsGene:HORVU6Hr1G055660	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43490	PANTHER:PTHR43490:SF37	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002008CCE	UniProt:F2EIC9	MapMan:50.1.1	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EIC9]

Coordinates

chrchr6H:+:354332521..354337794

Molecular Weight (calculated)

31776.0 Da

IEP (calculated)

8.935

GRAVY (calculated)

-0.097

Length

292 amino acids

Sequence
(BLAST)

001: MDCSSSKETP PHKAWWTGET VAVVTGANRG IGHALAARLA EQGLSVVLTA RDEARGEAAA AELRARGLQS VRFCRLDVAD PASVAAFASW IRDHFGGLDI
101: LVNNAAVSFN EIDTNSVEHA ETVLKTNFYG AKMLIEALLP LFRRSSGTSR ILNLSSQLGL LNKVRDPSLR SMLLDEGRLT EQQIEAMASR FLAQVKDGTW
201: QDHGWPAVWT DYAVSKLALN AYSRLLAARL RGTVAVNCFC PGFTQTDMTR GWGKRTAEEA GRVAAGLALL PPADLPTGKF FKWSTPQLYS KL

Best Arabidopsis Sequence Match ( AT3G59710.3 )
(BLAST)

001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.