CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007472.1-P	Field mustard	cytosol, peroxisome, plastid	99.32	99.32
CDX71880	Canola	peroxisome	94.86	94.86
CDX67809	Canola	peroxisome	86.3	85.42
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	79.79	72.59
VIT_05s0094g00770.t01	Wine grape	cytosol	59.93	58.92
TraesCS2D01G350600.1	Wheat	peroxisome	58.56	58.56
HORVU2Hr1G085650.1	Barley	cytosol, peroxisome	47.26	58.47
TraesCS2A01G353500.1	Wheat	peroxisome	58.22	58.22
TraesCS2B01G371400.1	Wheat	peroxisome	57.53	57.53
KRH50192	Soybean	cytosol	58.9	56.77
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	58.9	56.77
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	23.63	56.1
GSMUA_Achr8P28970_001	Banana	peroxisome	56.16	55.59
HORVU6Hr1G055660.3	Barley	cytosol, peroxisome, plastid	55.48	55.48
Zm00001d025761_P002	Maize	mitochondrion	55.14	55.14
OQU81866	Sorghum	cytosol, peroxisome, plastid	54.45	54.83
TraesCS6B01G247400.1	Wheat	peroxisome	54.79	54.79
Zm00001d003174_P001	Maize	extracellular, mitochondrion	54.79	54.42
Os02t0607700-01	Rice	cytosol, peroxisome, plastid	55.48	54.36
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	55.14	54.21
TraesCS6D01G200400.1	Wheat	peroxisome	54.11	54.11
TraesCS6A01G218000.1	Wheat	peroxisome	54.11	54.11
EES07125	Sorghum	cytosol, peroxisome, plastid	54.11	50.97
Zm00001d051041_P001	Maize	peroxisome	54.45	50.32
Os04t0496000-01	Rice	cytosol, peroxisome	23.97	49.3
CDX84895	Canola	cytosol	45.89	43.23
CDY45793	Canola	cytosol	45.89	43.23
CDY00233	Canola	cytosol	44.52	41.14
CDY53157	Canola	cytosol	44.52	41.14
Os04t0496150-00	Rice	cytosol	21.58	39.62
Zm00001d003173_P001	Maize	cytosol	51.37	39.37
CDY15148	Canola	cytosol	37.67	37.29
CDX90062	Canola	cytosol	36.99	36.61
CDY48937	Canola	cytosol	35.27	34.8
CDX89104	Canola	cytosol	32.88	34.78
CDY56927	Canola	endoplasmic reticulum, golgi	35.96	34.31
CDX71758	Canola	cytosol	33.9	33.45

Protein Annotations

EnsemblPlants:CDY05983	EnsemblPlantsGene:GSBRNA2T00121822001	Gene3D:3.40.50.720	GO:A0A078F2F1	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43490	PANTHER:PTHR43490:SF8	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ProteinID:CDY05983	ProteinID:CDY05983.1	SUPFAM:SSF51735	UniParc:UPI0004EDDB73	MapMan:50.1.1	:

Description

BnaA09g37970D

Coordinates

chrLK031967:+:84995..86406

Molecular Weight (calculated)

32423.9 Da

IEP (calculated)

9.769

GRAVY (calculated)

-0.092

Length

292 amino acids

Sequence
(BLAST)

001: MDHLVYPLPP TARWWSRETT AIVTGANKGI GFEVVKKLLE LGLTVVLTAR NAKNGSLAAD SLRRAGFQNV QFYCLDVSEP SSIAAFVSWF RHNFGVLDIL
101: VNNAAVSFNV VGDNSIREPE TIIKTNFYGA KLLTEALLPL FRRSVSASRI LNISSRLGSL NKLRNPSVRQ TLESEELTNE QIDATVTQFL EDVSNGTWEK
201: QGWPENWSDY AVSKMALNAY SRVLARRYNG KKLSVNCFCP GFTRTSMTGG QGTHTAEDVA ATIATLVLLP PEKLTSGKFF MFLEHKKIIS RL

Best Arabidopsis Sequence Match ( AT3G59710.3 )
(BLAST)

001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.