CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00233	Canola	cytosol	95.57	95.57
AT5G61830.1	Thale cress	cytosol	88.29	88.29
CDX84895	Canola	cytosol	64.87	66.13
CDY45793	Canola	cytosol	64.56	65.81
GSMUA_Achr4P15900_001	Banana	cytosol	62.03	62.03
Os01t0929500-01	Rice	cytosol	61.71	59.09
Zm00001d042250_P001	Maize	cytosol	60.44	58.95
EES04148	Sorghum	cytosol	60.44	58.95
HORVU3Hr1G096690.3	Barley	cytosol	59.49	58.39
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	58.54	57.45
TraesCS3D01G436600.1	Wheat	cytosol	58.23	57.14
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	57.59	56.7
CDX67809	Canola	peroxisome	41.77	44.75
CDY05983	Canola	cytosol, peroxisome, plastid	41.14	44.52
CDX71880	Canola	peroxisome	40.82	44.18
CDX71758	Canola	cytosol	38.61	41.22
CDY48937	Canola	cytosol	38.29	40.88
CDX89104	Canola	cytosol	34.49	39.49
CDY56927	Canola	endoplasmic reticulum, golgi	37.34	38.56
CDY15148	Canola	cytosol	35.76	38.31
CDX90062	Canola	cytosol	35.76	38.31

Protein Annotations

EnsemblPlants:CDY53157	EnsemblPlantsGene:GSBRNA2T00008698001	Gene3D:3.40.50.720	GO:A0A078IT28	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43490	PANTHER:PTHR43490:SF54	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY53157
ProteinID:CDY53157.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EE9B62	UniProt:A0A078IT28	MapMan:50.1.1

Description

BnaCnng24570DBnaCnng24570D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT28]

Coordinates

chrLK033171:-:46066..47416

Molecular Weight (calculated)

35282.8 Da

IEP (calculated)

9.274

GRAVY (calculated)

-0.383

Length

316 amino acids

Sequence
(BLAST)

001: MTNKEKARER REKRMQEISL LRTIPYSGHQ RWWSSENVVA VVTGSNRGIG LEIARQLASH GLTVVLTARN VDAGLEAVTS LRHQEGLKVD FHQLDVTDAS
101: SIKEFGRWIK QTFGGLDILV NNAGVNYNLG SDNSVEFAET VVSTNYHGTK NMIKAMIPLM RPSPQGARIV NVSSRLGRVY GRRNRLANVE LRDQLSNPDS
201: LTEDFIDRTV STFINQVKDG TWESGGWPQT FTDYSISKLA VNAYTRMIAK ELLTRQEGEK IYVNSFCPGW VKTAMTGFAG NTSPEDAADT GVWLSLALSQ
301: EAVTGKFFAE RREINF

Best Arabidopsis Sequence Match ( AT5G61830.1 )
(BLAST)

001: MTNKEKARER REKRMQEISL LRTIPYSDHH RWWSCENVAV VTGSNRGIGF EIARQLAVHG LTVVLTARNV NAGLEAVKSL RHQEEGLKVY FHQLDVTDSS
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF

Arabidopsis Description

At5g61830 [Source:UniProtKB/TrEMBL;Acc:Q501A2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.