Factsheet for AT5G61830.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019617.1-P	Field mustard	cytosol	88.61	88.61
CDY00233	Canola	cytosol	88.61	88.61
CDY53157	Canola	cytosol	88.29	88.29
AT5G51030.1	Thale cress	cytosol	66.77	67.2
GSMUA_Achr4P15900_001	Banana	cytosol	61.39	61.39
HORVU3Hr1G096690.3	Barley	cytosol	59.49	58.39
EES04148	Sorghum	cytosol	59.81	58.33
Zm00001d042250_P001	Maize	cytosol	59.81	58.33
Os01t0929500-01	Rice	cytosol	60.44	57.88
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	57.91	56.83
TraesCS3D01G436600.1	Wheat	cytosol	57.91	56.83
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	57.28	56.39
AT1G01800.1	Thale cress	cytosol	37.97	40.68
AT2G24190.2	Thale cress	cytosol	38.61	40.53
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	40.51	39.88
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	38.29	37.0

Protein Annotations

Gene3D:3.40.50.720	MapMan:50.1.1	EntrezGene:836305	UniProt:A0A178UP39	ProteinID:AED97523.1	ProteinID:ANM68317.1
ArrayExpress:AT5G61830	EnsemblPlantsGene:AT5G61830	RefSeq:AT5G61830	TAIR:AT5G61830	RefSeq:AT5G61830-TAIR-G	EnsemblPlants:AT5G61830.1
TAIR:AT5G61830.1	EMBL:BT022065	InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_001330081.1	RefSeq:NP_200991.1	ProteinID:OAO94752.1
PFAM:PF00106	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR43490	PANTHER:PTHR43490:SF54	UniProt:Q501A2
InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI000016290B	SEG:seg	:	:

Description

At5g61830 [Source:UniProtKB/TrEMBL;Acc:Q501A2]

Coordinates

chr5:+:24836898..24838970

Molecular Weight (calculated)

35641.4 Da

IEP (calculated)

8.449

GRAVY (calculated)

-0.439

Length

316 amino acids

Sequence
(BLAST)

001: MTNKEKARER REKRMQEISL LRTIPYSDHH RWWSCENVAV VTGSNRGIGF EIARQLAVHG LTVVLTARNV NAGLEAVKSL RHQEEGLKVY FHQLDVTDSS
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.