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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:cytosol, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT2G24190.2 Thale cress cytosol 77.68 84.39
CDX71758 Canola cytosol 75.23 83.11
CDY48937 Canola cytosol 74.31 82.09
Bra007585.1-P Field mustard cytosol 74.31 82.09
CDX89104 Canola cytosol 65.14 77.17
Bra014448.1-P Field mustard cytosol 69.72 76.77
CDY56927 Canola endoplasmic reticulum, golgi 69.72 74.51
PGSC0003DMT400000078 Potato cytosol 57.19 62.33
AT1G01800.1 Thale cress cytosol 55.05 61.02
Solyc01g094220.2.1 Tomato cytosol 55.96 61.0
Solyc01g099560.2.1 Tomato cytosol 31.8 58.76
KRH40500 Soybean cytosol, nucleus 52.6 58.5
PGSC0003DMT400088659 Potato cytosol 20.18 55.93
Solyc01g094260.2.1 Tomato cytosol 54.43 55.8
PGSC0003DMT400000067 Potato golgi, peroxisome 49.54 55.67
Solyc01g094210.2.1 Tomato cytosol 50.15 55.22
Solyc01g094250.2.1 Tomato cytosol 53.82 55.17
Solyc01g094240.2.1 Tomato cytosol 53.52 55.03
KRH65114 Soybean cytosol 48.93 54.42
PGSC0003DMT400000080 Potato cytosol, mitochondrion, plastid 49.85 53.27
Solyc01g094270.2.1 Tomato cytosol, plastid 50.46 52.38
KXG31187 Sorghum mitochondrion 44.65 49.16
HORVU5Hr1G031560.1 Barley cytosol 18.96 48.82
TraesCS2D01G517700.1 Wheat cytosol 45.26 48.05
EES11175 Sorghum cytosol, plastid 43.73 47.83
PGSC0003DMT400026580 Potato cytosol 45.26 47.74
Solyc10g017570.2.1 Tomato cytosol 44.65 47.1
TraesCS2A01G516200.2 Wheat mitochondrion 43.73 47.04
EES11173 Sorghum cytosol 44.65 46.95
Os04t0531700-01 Rice mitochondrion 15.6 46.79
TraesCS2B01G544800.1 Wheat cytosol 44.04 46.75
EER93229 Sorghum cytosol 44.65 46.5
EES11167 Sorghum cytosol 44.04 46.45
Os04t0532100-01 Rice cytosol 43.73 46.28
TraesCS2D01G367200.1 Wheat cytosol 43.12 45.63
TraesCS2A01G370900.1 Wheat cytosol 43.12 45.63
TraesCS2A01G371100.1 Wheat cytosol 42.51 45.57
EES11174 Sorghum cytosol 43.12 45.48
TraesCS2D01G367800.1 Wheat cytosol, plastid 42.51 45.42
TraesCS2A01G371400.1 Wheat cytosol, plastid 42.51 45.42
EES07553 Sorghum cytosol 42.81 45.31
TraesCS2B01G388200.2 Wheat cytosol 37.31 45.19
TraesCS2B01G388700.1 Wheat cytosol, plastid 42.2 45.1
TraesCS2B01G388300.1 Wheat cytosol 42.81 44.87
OQU82017 Sorghum extracellular 22.63 44.85
EES07552 Sorghum cytosol 42.2 44.81
TraesCS2A01G371000.1 Wheat cytosol 42.2 44.81
TraesCS2B01G388600.1 Wheat cytosol, plastid 41.9 44.77
TraesCS2B01G388100.1 Wheat cytosol 43.12 44.76
EES11171 Sorghum cytosol 42.51 44.69
TraesCS2D01G367700.1 Wheat mitochondrion 42.2 44.66
Os04t0531900-01 Rice cytosol, plastid 41.9 44.63
EES07551 Sorghum cytosol 41.28 44.55
KXG31133 Sorghum cytosol 39.45 44.48
HORVU2Hr1G091460.1 Barley cytosol, mitochondrion, plastid 42.51 44.27
HORVU7Hr1G024270.5 Barley cytosol 41.28 43.97
TraesCS2A01G371200.1 Wheat cytosol 40.98 43.93
KXG26779 Sorghum cytosol 41.59 43.73
TraesCS7A01G111500.1 Wheat cytosol 29.66 43.69
TraesCS7A01G114100.1 Wheat cytosol 40.98 43.65
Os04t0532400-01 Rice cytosol 40.98 43.65
TraesCS2A01G371300.1 Wheat cytosol 39.76 43.33
TraesCS2D01G367600.2 Wheat plastid 41.59 43.31
HORVU2Hr1G091430.7 Barley cytosol 41.28 43.13
HORVU1Hr1G064390.1 Barley cytosol 40.67 42.9
EES07554 Sorghum cytosol 40.37 42.86
TraesCS2D01G099300.1 Wheat cytosol 40.98 42.68
TraesCS2A01G099800.1 Wheat cytosol 40.98 42.68
TraesCS1B01G437500.1 Wheat cytosol 40.67 42.63
EES17690 Sorghum cytosol 21.71 42.52
TraesCS1D01G415900.1 Wheat cytosol 40.37 42.31
EER97757 Sorghum cytosol 42.81 42.3
GSMUA_Achr5P12200_001 Banana cytosol 40.67 42.22
TraesCS2B01G116700.1 Wheat mitochondrion 40.37 42.04
EES09734 Sorghum cytosol 39.76 41.8
HORVU1Hr1G089830.1 Barley cytosol 39.45 41.35
TraesCS2A01G371500.1 Wheat plastid 42.2 41.19
TraesCS2D01G367400.1 Wheat plastid 42.81 40.23
HORVU2Hr1G091440.3 Barley mitochondrion 43.43 39.89
HORVU2Hr1G114340.4 Barley endoplasmic reticulum, golgi 44.04 39.45
AT5G61830.1 Thale cress cytosol 37.0 38.29
AT5G51030.1 Thale cress cytosol 36.7 38.22
TraesCS1A01G408800.1 Wheat cytosol 39.45 38.05
TraesCS2B01G388500.1 Wheat cytosol, mitochondrion, nucleus 18.35 37.74
OQU85768 Sorghum cytosol 41.28 37.6
HORVU2Hr1G017120.1 Barley plastid 42.2 37.6
TraesCS2D01G099500.1 Wheat plastid 42.81 37.23
TraesCS2B01G117000.1 Wheat plastid 42.2 36.6
Os07t0685800-01 Rice plastid 41.59 36.46
TraesCS2A01G100000.2 Wheat plastid 41.9 36.44
KXG36979 Sorghum plastid 40.67 35.56
HORVU5Hr1G031520.2 Barley cytosol 28.13 32.86
AT3G59710.2 Thale cress cytosol, peroxisome, plastid 32.11 32.71
Os02t0640600-00 Rice mitochondrion 36.09 31.72
GSMUA_Achr5P12210_001 Banana mitochondrion 41.59 22.15
Os04t0531750-00 Rice mitochondrion 2.14 2.11
Protein Annotations
Gene3D:3.40.50.720MapMan:50.1.1EntrezGene:825294UniProt:A0A1I9LNT2ProteinID:ANM64240.1ArrayExpress:AT3G61220
EnsemblPlantsGene:AT3G61220RefSeq:AT3G61220TAIR:AT3G61220RefSeq:AT3G61220-TAIR-GEnsemblPlants:AT3G61220.3Unigene:At.972
InterPro:NAD(P)-bd_dom_sfRefSeq:NP_001326283.1PFAM:PF00106PFAM:PF13561PRINTS:PR00080PRINTS:PR00081
PANTHER:PTHR43490PANTHER:PTHR43490:SF58InterPro:SDR_famSUPFAM:SSF51735UniParc:UPI000848D0A8SEG:seg
Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNT2]
Coordinates
chr3:+:22662877..22664316
Molecular Weight (calculated)
36381.7 Da
IEP (calculated)
5.036
GRAVY (calculated)
-0.089
Length
327 amino acids
Sequence
(BLAST)
001: MAEETPRYVL NLLLVLDLVC NLSEFGSDFL RLFNGFCRYA VVTGANRGIG FEICRQLASE GIRVVLTSRD ENRGLEAVET LKKELEISDQ SLLFHQLDVA
101: DPASITSLAE FVKTQFGKLD ILVNNAGIGG IITDAEALRA GAGKEGFKWD EIITETYELT EECIKINYYG PKRMCEAFIP LLKLSDSPRI VNVSSSMGQL
201: KNVLNEWAKG ILSDAENLTE ERIDQVINQL LNDFKEGTVK EKNWAKFMSA YVVSKASLNG YTRVLAKKHP EFRVNAVCPG FVKTDMNFKT GVLSVEEGAS
301: SPVRLALLPH QETPSGCFFS RKQVSEF
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.