Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES11171 | Sorghum | cytosol | 72.49 | 72.03 |
| EES11173 | Sorghum | cytosol | 70.87 | 70.42 |
| EES11167 | Sorghum | cytosol | 69.9 | 69.68 |
| Zm00001d025922_P001 | Maize | nucleus | 69.9 | 69.45 |
| EES11174 | Sorghum | cytosol | 69.58 | 69.35 |
| Zm00001d002847_P001 | Maize | cytosol | 70.23 | 69.11 |
| EES11175 | Sorghum | cytosol, plastid | 66.67 | 68.9 |
| Zm00001d025923_P001 | Maize | cytosol | 66.99 | 66.56 |
| Os04t0531900-01 | Rice | cytosol, plastid | 66.02 | 66.45 |
| Os04t0532400-01 | Rice | cytosol | 65.7 | 66.12 |
| EER93229 | Sorghum | cytosol | 66.99 | 65.92 |
| Zm00001d002848_P001 | Maize | cytosol, plastid | 67.96 | 65.83 |
| Zm00001d013022_P001 | Maize | cytosol | 65.7 | 63.44 |
| EES09734 | Sorghum | cytosol | 62.46 | 62.06 |
| EES17690 | Sorghum | cytosol | 33.01 | 61.08 |
| Zm00001d025924_P001 | Maize | mitochondrion | 66.67 | 60.23 |
| Os04t0531700-01 | Rice | mitochondrion | 19.09 | 54.13 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 52.1 | 54.03 |
| Bra032567.1-P | Field mustard | cytosol | 20.39 | 53.85 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 51.46 | 53.36 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 51.13 | 53.2 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 51.13 | 53.2 |
| KRH40499 | Soybean | cytosol | 18.77 | 52.73 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 50.49 | 52.35 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 50.16 | 52.19 |
| KRH48198 | Soybean | cytosol | 48.22 | 51.56 |
| PGSC0003DMT400000067 | Potato | golgi, peroxisome | 48.54 | 51.55 |
| KRH00696 | Soybean | mitochondrion | 48.87 | 51.36 |
| KRH48196 | Soybean | cytosol | 48.54 | 50.68 |
| VIT_06s0061g00670.t01 | Wine grape | plastid | 49.84 | 50.66 |
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 49.84 | 50.66 |
| KRH00691 | Soybean | cytosol | 41.75 | 50.59 |
| KRH48194 | Soybean | cytosol | 48.22 | 50.0 |
| PGSC0003DMT400088659 | Potato | cytosol | 19.09 | 50.0 |
| KRH48202 | Soybean | cytosol | 48.22 | 49.83 |
| KRH65113 | Soybean | cytosol | 48.22 | 49.83 |
| Solyc01g094210.2.1 | Tomato | cytosol | 47.57 | 49.49 |
| Bra032573.1-P | Field mustard | cytosol | 21.36 | 49.25 |
| Solyc01g099560.2.1 | Tomato | cytosol | 27.83 | 48.59 |
| KRH40500 | Soybean | cytosol, nucleus | 45.95 | 48.3 |
| KRH48206 | Soybean | cytosol | 47.57 | 48.2 |
| PGSC0003DMT400000078 | Potato | cytosol | 46.6 | 48.0 |
| Solyc01g094220.2.1 | Tomato | cytosol | 46.6 | 48.0 |
| CDX71758 | Canola | cytosol | 45.31 | 47.3 |
| Solyc11g071460.1.1 | Tomato | cytosol | 45.63 | 47.16 |
| Bra014448.1-P | Field mustard | cytosol | 45.31 | 47.14 |
| PGSC0003DMT400048181 | Potato | cytosol | 45.31 | 46.82 |
| PGSC0003DMT400048179 | Potato | cytosol | 45.31 | 46.82 |
| Bra007585.1-P | Field mustard | cytosol | 44.66 | 46.62 |
| CDY48937 | Canola | cytosol | 44.66 | 46.62 |
| CDX89104 | Canola | cytosol | 41.42 | 46.38 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 29.77 | 46.23 |
| PGSC0003DMT400047834 | Potato | cytosol | 44.66 | 46.15 |
| Solyc01g094240.2.1 | Tomato | cytosol | 47.25 | 45.91 |
| KRH65115 | Soybean | cytosol | 48.22 | 45.85 |
| AT1G01800.1 | Thale cress | cytosol | 43.69 | 45.76 |
| KRH65114 | Soybean | cytosol | 43.37 | 45.58 |
| CDY56927 | Canola | endoplasmic reticulum, golgi | 44.98 | 45.42 |
| Solyc01g094260.2.1 | Tomato | cytosol | 46.6 | 45.14 |
| PGSC0003DMT400048175 | Potato | cytosol, peroxisome, plastid | 18.45 | 44.88 |
| Solyc01g094250.2.1 | Tomato | cytosol | 46.28 | 44.83 |
| PGSC0003DMT400000080 | Potato | cytosol, mitochondrion, plastid | 44.34 | 44.77 |
| Solyc01g094270.2.1 | Tomato | cytosol, plastid | 45.63 | 44.76 |
| CDY15148 | Canola | cytosol | 42.72 | 44.75 |
| AT2G24190.2 | Thale cress | cytosol | 43.37 | 44.52 |
| Bra033230.1-P | Field mustard | cytosol | 42.07 | 44.07 |
| KRH17659 | Soybean | cytosol | 13.92 | 43.88 |
| AT3G61220.3 | Thale cress | endoplasmic reticulum, vacuole | 46.28 | 43.73 |
| CDX90062 | Canola | cytosol | 41.75 | 43.73 |
| Solyc10g017570.2.1 | Tomato | cytosol | 42.72 | 42.58 |
| PGSC0003DMT400026580 | Potato | cytosol | 42.72 | 42.58 |
| Os07t0685800-01 | Rice | plastid | 46.28 | 38.34 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 31.07 | 38.1 |
| KRH40504 | Soybean | endoplasmic reticulum | 47.9 | 37.95 |
| Os02t0607700-01 | Rice | cytosol, peroxisome, plastid | 36.57 | 37.92 |
| Os04t0496000-01 | Rice | cytosol, peroxisome | 16.5 | 35.92 |
| Solyc11g042710.1.1 | Tomato | cytosol | 18.12 | 35.44 |
| Os01t0929500-01 | Rice | cytosol | 35.92 | 33.64 |
| Os04t0496150-00 | Rice | cytosol | 16.5 | 32.08 |
| Os02t0640600-00 | Rice | mitochondrion | 38.19 | 31.72 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 25.24 | 22.81 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 50.81 | 21.13 |
| Os04t0531750-00 | Rice | mitochondrion | 5.18 | 4.83 |
Protein Annotations
| Gene3D:3.40.50.720 | EntrezGene:4336495 | MapMan:50.1.1 | EMBL:AK109281 | ProteinID:BAF15316.1 | ProteinID:BAS90223.1 |
| ProteinID:CAD41153.2 | ProteinID:CAE04565.2 | ncoils:Coil | InterPro:NAD(P)-bd_dom_sf | EnsemblPlantsGene:Os04g0532100 | EnsemblPlants:Os04t0532100-01 |
| PFAM:PF00106 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 | PANTHER:PTHR43490 | PANTHER:PTHR43490:SF26 |
| UniProt:Q7X779 | InterPro:SDR_fam | SUPFAM:SSF51735 | UniParc:UPI000021C8AE | RefSeq:XP_015635600.1 | SEG:seg |
Description
Short-chain dehydrogenase/reductase SDR domain containing protein. (Os04t0532100-01)
Coordinates
chr4:-:26611746..26613837
Molecular Weight (calculated)
33218.6 Da
IEP (calculated)
5.478
GRAVY (calculated)
-0.068
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETIFSSTH TRIAVVTGGN KGIGLEVCRQ LAGNGATVVL TARDEAKGAA AVEKLHGLGL SSVIFHQLDV TDASSIARLA EFLESRFGRL DILVNNAAVG
101: GIVPVDDPSF GLLPTEEKFS GMDGHQRIEW MWKNCRQTYD AAKAGLKTNY YGTKNVTEAL LPLLQSSSDG RIVNVASSFG LLRFFTNEEL KRELNDADSL
201: SEERLDELLG MFVRDFEAGA VAERGWPTEF SAYKVAKAAM SAYARILARK RPALRVNCVD PGYVKTDLTR NSGLLTPEEG ASRVVAVALL PAGGPTGALF
301: DGGKEASFV
101: GIVPVDDPSF GLLPTEEKFS GMDGHQRIEW MWKNCRQTYD AAKAGLKTNY YGTKNVTEAL LPLLQSSSDG RIVNVASSFG LLRFFTNEEL KRELNDADSL
201: SEERLDELLG MFVRDFEAGA VAERGWPTEF SAYKVAKAAM SAYARILARK RPALRVNCVD PGYVKTDLTR NSGLLTPEEG ASRVVAVALL PAGGPTGALF
301: DGGKEASFV
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.