Factsheet for Os02t0607700-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 3
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G055660.3	Barley	cytosol, peroxisome, plastid	87.25	89.04
TraesCS6B01G247400.1	Wheat	peroxisome	86.91	88.7
TraesCS6A01G218000.1	Wheat	peroxisome	86.91	88.7
TraesCS6D01G200400.1	Wheat	peroxisome	85.57	87.33
EES07125	Sorghum	cytosol, peroxisome, plastid	84.23	80.97
Zm00001d051041_P001	Maize	peroxisome	83.89	79.11
Os04t0496000-01	Rice	cytosol, peroxisome	35.91	75.35
GSMUA_Achr8P28970_001	Banana	peroxisome	66.44	67.12
VIT_05s0094g00770.t01	Wine grape	cytosol	58.72	58.92
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	58.05	57.1
KRH50192	Soybean	cytosol	57.38	56.44
Os04t0496150-00	Rice	cytosol	29.87	55.97
CDY05983	Canola	cytosol, peroxisome, plastid	54.36	55.48
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	54.7	54.88
CDX71880	Canola	peroxisome	53.69	54.79
Bra007472.1-P	Field mustard	cytosol, peroxisome, plastid	53.69	54.79
CDX67809	Canola	peroxisome	54.03	54.58
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	22.48	54.47
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	56.04	52.02
Os01t0929500-01	Rice	cytosol	46.31	41.82
Os04t0531700-01	Rice	mitochondrion	14.77	40.37
Os04t0531900-01	Rice	cytosol, plastid	40.6	39.41
Os04t0532400-01	Rice	cytosol	38.93	37.78
Os04t0532100-01	Rice	cytosol	37.92	36.57
Os07t0685800-01	Rice	plastid	34.23	27.35
Os02t0640600-00	Rice	mitochondrion	29.19	23.39
Os04t0531750-00	Rice	mitochondrion	2.68	2.42

Protein Annotations

Gene3D:3.40.50.720	EntrezGene:4329932	MapMan:50.1.1	EMBL:AK109261	ProteinID:BAD20143.1	ProteinID:BAF09297.1
ProteinID:BAS79678.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os02g0607700	EnsemblPlants:Os02t0607700-01	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR43490	PANTHER:PTHR43490:SF37	UniProt:Q6K1Y8	InterPro:SDR_fam
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0000375A68	RefSeq:XP_015623825.1	SEG:seg	:

Description

Short-chain dehydrogenase/reductase SDR domain containing protein. (Os02t0607700-01)

Coordinates

chr2:-:23829191..23834725

Molecular Weight (calculated)

32101.4 Da

IEP (calculated)

10.008

GRAVY (calculated)

-0.053

Length

298 amino acids

Sequence
(BLAST)

001: MDLSSSKEAT PPPEAWWTGE TVAVVTGANR GIGHALAARL AEQGLAVVLT ARDGARGEAA AAALRARGLR SVRFRRLDVS DPASVAAFAS WLRDELGGLD
101: ILVNNAAVSF NEIDTNSVEH AETVLRTNFY GAKMLIEALL PLFRRSAANS RILNISSQLG LLNKVRDPSL RSMLLDEASL TEGKIERMAS RFLAEVKDGT
201: WSAPGRGWPA VWTDYAVSKL ALNAYSRVLA ARLARGGDRV AVNCFCPGFT RTDMTRGWGT RTAEEAGRVA AGLALLPPGD LPTGKFFKWC TPQLYSKL

Best Arabidopsis Sequence Match ( AT3G59710.3 )
(BLAST)

001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.