Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0531700-01 | Rice | mitochondrion | 27.04 | 39.45 |
| Os02t0607700-01 | Rice | cytosol, peroxisome, plastid | 55.97 | 29.87 |
| GSMUA_Achr8P28970_001 | Banana | peroxisome | 44.03 | 23.73 |
| KRH71272 | Soybean | cytosol, mitochondrion, peroxisome | 43.4 | 22.77 |
| KRH50192 | Soybean | cytosol | 43.4 | 22.77 |
| VIT_05s0094g00770.t01 | Wine grape | cytosol | 41.51 | 22.22 |
| Bra007472.1-P | Field mustard | cytosol, peroxisome, plastid | 39.62 | 21.58 |
| CDY05983 | Canola | cytosol, peroxisome, plastid | 39.62 | 21.58 |
| AT3G59710.2 | Thale cress | cytosol, peroxisome, plastid | 43.4 | 21.5 |
| CDX67809 | Canola | peroxisome | 39.62 | 21.36 |
| CDX71880 | Canola | peroxisome | 38.99 | 21.23 |
| Solyc03g059190.2.1 | Tomato | cytosol, peroxisome, plastid | 38.36 | 20.54 |
| Os04t0532400-01 | Rice | cytosol | 38.36 | 19.87 |
| Os04t0531900-01 | Rice | cytosol, plastid | 37.11 | 19.22 |
| Os01t0929500-01 | Rice | cytosol | 35.22 | 16.97 |
| Os04t0532100-01 | Rice | cytosol | 32.08 | 16.5 |
| Os04t0496000-01 | Rice | cytosol, peroxisome | 10.06 | 11.27 |
| Os07t0685800-01 | Rice | plastid | 26.42 | 11.26 |
| Os02t0640600-00 | Rice | mitochondrion | 22.64 | 9.68 |
| PGSC0003DMT400022011 | Potato | cytosol, peroxisome, plastid | 3.14 | 4.07 |
| Os04t0531750-00 | Rice | mitochondrion | 0.63 | 0.3 |
Protein Annotations
| EnsemblPlants:Os04t0496150-00 | EnsemblPlantsGene:Os04g0496150 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF8 | PFAM:PF00106 | PRINTS:PR00081 | ProteinID:BAS89890.1 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI000393BBAF | UniProt:A0A0P0WC51 | MapMan:50.1.1 | : | : | : |
Description
Similar to H0306B06.2 protein. (Os04t0496150-00)
Coordinates
chr4:-:24815492..24816067
Molecular Weight (calculated)
17157.3 Da
IEP (calculated)
11.169
GRAVY (calculated)
-0.103
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MDYSSSKEPS SARAWWTRET VAVVTGANRG IGLALAARLG EHGITVVLTA RDAERGEAAA AALRARGLHV VFHRLDVADP ASVQAFAAWL RDAIGGLDIL
101: VSQSAITSNQ TPFPFSEVSA RPSLLRLLHS PDDGNVSYRQ QFRPRSATLI LHSKRSRSV
101: VSQSAITSNQ TPFPFSEVSA RPSLLRLLHS PDDGNVSYRQ QFRPRSATLI LHSKRSRSV
001: MVGSKEKSKE KRDKRLQEIS LLRTIPYSDH QRWWTSETVA VVTGANRGIG FEMVRQLAGH GLTVILTSRD ENVGVEAAKI LQEGGFNVDF HRLDILDSSS
101: IQEFCEWIKE KYGFIDVLIN NAGVNYNVGS DNSVEFSHMV ISTNYYGTKN IINAMIPLMR HACQGARIVN VTSRLGRLKG RHSKLENEDV RAKLMDVDSL
201: TEEIVDKTVS EFLKQVEEGT WESGGWPHSF TDYSVSKMAV NAYTRVLAKE LSERPEGEKI YANCFCPGWV KTAMTGYAGN VSAEDGADTG VWLALLPDQA
301: ITGKFFAERR EISF
101: IQEFCEWIKE KYGFIDVLIN NAGVNYNVGS DNSVEFSHMV ISTNYYGTKN IINAMIPLMR HACQGARIVN VTSRLGRLKG RHSKLENEDV RAKLMDVDSL
201: TEEIVDKTVS EFLKQVEEGT WESGGWPHSF TDYSVSKMAV NAYTRVLAKE LSERPEGEKI YANCFCPGWV KTAMTGYAGN VSAEDGADTG VWLALLPDQA
301: ITGKFFAERR EISF
Arabidopsis Description
At5g51030 [Source:UniProtKB/TrEMBL;Acc:Q9FI45]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.