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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
EpiLoc:cytosol
MultiLoc:mitochondrion
Plant-mPloc:plastid
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH40499 Soybean cytosol 45.87 45.45
KRH17659 Soybean cytosol 34.86 38.78
Bra032567.1-P Field mustard cytosol 41.28 38.46
PGSC0003DMT400048175 Potato cytosol, peroxisome, plastid 39.45 33.86
Bra032573.1-P Field mustard cytosol 41.28 33.58
Os04t0496150-00 Rice cytosol 39.45 27.04
TraesCS2D01G367800.1 Wheat cytosol, plastid 71.56 25.49
TraesCS2B01G388700.1 Wheat cytosol, plastid 70.64 25.16
TraesCS2A01G371300.1 Wheat cytosol 66.97 24.33
TraesCS2A01G371500.1 Wheat plastid 71.56 23.28
Os04t0532400-01 Rice cytosol 54.13 19.22
CDX89104 Canola cytosol 48.62 19.2
Os04t0532100-01 Rice cytosol 54.13 19.09
Solyc11g042710.1.1 Tomato cytosol 27.52 18.99
Os04t0531900-01 Rice cytosol, plastid 52.29 18.57
KRH48198 Soybean cytosol 48.62 18.34
CDY48937 Canola cytosol 49.54 18.24
CDX71758 Canola cytosol 49.54 18.24
Bra007585.1-P Field mustard cytosol 49.54 18.24
VIT_15s0046g03570.t01 Wine grape plastid 49.54 18.18
VIT_15s0046g03580.t01 Wine grape cytosol, peroxisome, plastid 49.54 18.18
VIT_15s0046g03590.t01 Wine grape cytosol, peroxisome, plastid 49.54 18.18
VIT_15s0046g03600.t01 Wine grape cytosol 49.54 18.12
Bra014448.1-P Field mustard cytosol 48.62 17.85
KRH48194 Soybean cytosol 48.62 17.79
VIT_06s0061g00670.t01 Wine grape plastid 49.54 17.76
KRH48202 Soybean cytosol 48.62 17.73
KRH00696 Soybean mitochondrion 47.71 17.69
CDY56927 Canola endoplasmic reticulum, golgi 49.54 17.65
PGSC0003DMT400000067 Potato golgi, peroxisome 46.79 17.53
VIT_15s0046g03550.t01 Wine grape cytosol 47.71 17.45
KRH48206 Soybean cytosol 48.62 17.38
KRH65114 Soybean cytosol 46.79 17.35
VIT_06s0061g00640.t01 Wine grape cytosol 47.71 17.11
KRH65113 Soybean cytosol 46.79 17.06
KRH48196 Soybean cytosol 45.87 16.89
VIT_15s0046g03650.t01 Wine grape cytosol 45.87 16.78
Solyc01g094220.2.1 Tomato cytosol 45.87 16.67
KRH65115 Soybean cytosol 49.54 16.62
PGSC0003DMT400000078 Potato cytosol 44.95 16.33
KRH40500 Soybean cytosol, nucleus 44.04 16.33
Solyc01g094260.2.1 Tomato cytosol 47.71 16.3
Solyc01g094250.2.1 Tomato cytosol 47.71 16.3
Solyc11g071460.1.1 Tomato cytosol 44.04 16.05
PGSC0003DMT400048179 Potato cytosol 44.04 16.05
PGSC0003DMT400048181 Potato cytosol 44.04 16.05
AT1G01800.1 Thale cress cytosol 43.12 15.93
CDY15148 Canola cytosol 43.12 15.93
Solyc01g094210.2.1 Tomato cytosol 43.12 15.82
PGSC0003DMT400047834 Potato cytosol 43.12 15.72
PGSC0003DMT400000080 Potato cytosol, mitochondrion, plastid 44.04 15.69
AT2G24190.2 Thale cress cytosol 43.12 15.61
AT3G61220.3 Thale cress endoplasmic reticulum, vacuole 46.79 15.6
CDX90062 Canola cytosol 42.2 15.59
Bra033230.1-P Field mustard cytosol 42.2 15.59
Solyc01g094270.2.1 Tomato cytosol, plastid 44.95 15.56
Solyc01g094240.2.1 Tomato cytosol 44.04 15.09
Os02t0607700-01 Rice cytosol, peroxisome, plastid 40.37 14.77
PGSC0003DMT400026580 Potato cytosol 41.28 14.52
Solyc10g017570.2.1 Tomato cytosol 41.28 14.52
Os01t0929500-01 Rice cytosol 42.2 13.94
Os07t0685800-01 Rice plastid 44.04 12.87
KRH00691 Soybean cytosol 29.36 12.55
KRH40504 Soybean endoplasmic reticulum 44.04 12.31
Os02t0640600-00 Rice mitochondrion 30.28 8.87
VIT_06s0061g00620.t01 Wine grape mitochondrion, plastid 50.46 7.4
VIT_06s0009g01450.t01 Wine grape plastid 9.17 3.97
Os04t0496000-01 Rice cytosol, peroxisome 4.59 3.52
OQU82017 Sorghum extracellular 4.59 3.03
TraesCS2B01G388500.1 Wheat cytosol, mitochondrion, nucleus 3.67 2.52
VIT_02s0025g04510.t01 Wine grape cytosol 2.75 1.51
VIT_15s0046g03530.t01 Wine grape cytosol 3.67 1.17
Solyc01g099560.2.1 Tomato cytosol 0.92 0.56
Os04t0531750-00 Rice mitochondrion 0.0 0.0
PGSC0003DMT400088659 Potato cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Os04t0531700-01EnsemblPlantsGene:Os04g0531700Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famPANTHER:PTHR43490
PANTHER:PTHR43490:SF26PFAM:PF00106ProteinID:BAF15313.2ProteinID:BAS90219.1SUPFAM:SSF51735UniParc:UPI0001B66BDA
UniProt:Q0JBH4MapMan:50.1.1::::
Description
Short-chain dehydrogenase/reductase SDR domain containing protein. (Os04t0531700-01)
Coordinates
chr4:+:26580262..26582931
Molecular Weight (calculated)
11782.2 Da
IEP (calculated)
8.833
GRAVY (calculated)
0.154
Length
109 amino acids
Sequence
(BLAST)
001: TVRSWHCGLS IIRIALVTGG NKGVGLETCR QLASRGLRVV LTARNEARGL EAVDGIRRSG AADSDVVFHQ LDVTDAASVA RLADFVRDQF GRLDILVWAS
101: LRDFGSSML
Best Arabidopsis Sequence Match ( AT3G61220.1 )
(BLAST)
001: MAEETPRYAV VTGANRGIGF EICRQLASEG IRVVLTSRDE NRGLEAVETL KKELEISDQS LLFHQLDVAD PASITSLAEF VKTQFGKLDI LVNNAGIGGI
101: ITDAEALRAG AGKEGFKWDE IITETYELTE ECIKINYYGP KRMCEAFIPL LKLSDSPRIV NVSSSMGQLK NVLNEWAKGI LSDAENLTEE RIDQVINQLL
201: NDFKEGTVKE KNWAKFMSAY VVSKASLNGY TRVLAKKHPE FRVNAVCPGF VKTDMNFKTG VLSVEEGASS PVRLALLPHQ ETPSGCFFSR KQVSEF
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNT2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.