Factsheet for VIT_02s0025g04510.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82017	Sorghum	extracellular	41.21	49.7
EES17690	Sorghum	cytosol	36.18	43.11
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	31.66	39.62
VIT_06s0009g01450.t01	Wine grape	plastid	49.25	38.89
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	52.26	35.02
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	51.76	34.68
VIT_15s0046g03650.t01	Wine grape	cytosol	50.75	33.89
VIT_15s0046g03550.t01	Wine grape	cytosol	50.75	33.89
VIT_15s0046g03600.t01	Wine grape	cytosol	50.75	33.89
VIT_06s0061g00670.t01	Wine grape	plastid	51.26	33.55
VIT_15s0046g03570.t01	Wine grape	plastid	49.75	33.33
VIT_06s0061g00640.t01	Wine grape	cytosol	50.75	33.22
TraesCS2A01G371100.1	Wheat	cytosol	48.74	31.8
TraesCS2A01G371000.1	Wheat	cytosol	48.74	31.49
TraesCS2B01G388300.1	Wheat	cytosol	48.74	31.09
TraesCS2B01G388600.1	Wheat	cytosol, plastid	47.74	31.05
TraesCS7A01G114100.1	Wheat	cytosol	47.74	30.94
TraesCS2D01G367700.1	Wheat	mitochondrion	47.74	30.74
TraesCS2A01G371400.1	Wheat	cytosol, plastid	47.24	30.72
Os04t0531900-01	Rice	cytosol, plastid	47.24	30.62
TraesCS2A01G371200.1	Wheat	cytosol	46.73	30.49
Os04t0532400-01	Rice	cytosol	46.73	30.29
EES11175	Sorghum	cytosol, plastid	45.23	30.1
EES11167	Sorghum	cytosol	46.73	30.0
EES11174	Sorghum	cytosol	46.73	30.0
HORVU7Hr1G024270.5	Barley	cytosol	46.23	29.97
EES11173	Sorghum	cytosol	46.73	29.9
Os04t0532100-01	Rice	cytosol	46.23	29.77
TraesCS2B01G388700.1	Wheat	cytosol, plastid	45.73	29.74
TraesCS2D01G367800.1	Wheat	cytosol, plastid	45.73	29.74
HORVU1Hr1G064390.1	Barley	cytosol	46.23	29.68
HORVU2Hr1G091430.7	Barley	cytosol	46.23	29.39
TraesCS2D01G367600.2	Wheat	plastid	46.23	29.3
TraesCS2A01G370900.1	Wheat	cytosol	45.23	29.13
KXG31187	Sorghum	mitochondrion	43.22	28.96
TraesCS2A01G516200.2	Wheat	mitochondrion	44.22	28.95
EES11171	Sorghum	cytosol	45.23	28.94
TraesCS2D01G367200.1	Wheat	cytosol	44.72	28.8
EER93229	Sorghum	cytosol	45.23	28.66
KXG31133	Sorghum	cytosol	41.71	28.62
EES07552	Sorghum	cytosol	44.22	28.57
TraesCS2A01G371300.1	Wheat	cytosol	42.71	28.33
TraesCS2D01G517700.1	Wheat	cytosol	43.72	28.25
TraesCS2B01G544800.1	Wheat	cytosol	43.72	28.25
EES07553	Sorghum	cytosol	43.72	28.16
GSMUA_Achr5P12200_001	Banana	cytosol	44.22	27.94
TraesCS2B01G388100.1	Wheat	cytosol	44.22	27.94
EES07551	Sorghum	cytosol	42.21	27.72
HORVU2Hr1G091460.1	Barley	cytosol, mitochondrion, plastid	43.72	27.71
EES07554	Sorghum	cytosol	42.71	27.6
TraesCS2D01G367400.1	Wheat	plastid	48.24	27.59
TraesCS2B01G388200.2	Wheat	cytosol	37.19	27.41
HORVU2Hr1G091440.3	Barley	mitochondrion	48.74	27.25
TraesCS2A01G371500.1	Wheat	plastid	45.73	27.16
EES09734	Sorghum	cytosol	42.21	27.01
TraesCS2D01G099300.1	Wheat	cytosol	41.71	26.43
TraesCS2A01G099800.1	Wheat	cytosol	41.71	26.43
TraesCS2B01G116700.1	Wheat	mitochondrion	41.71	26.43
KXG26779	Sorghum	cytosol	41.21	26.37
EER97757	Sorghum	cytosol	42.71	25.68
TraesCS1D01G415900.1	Wheat	cytosol	39.7	25.32
TraesCS1B01G437500.1	Wheat	cytosol	39.7	25.32
HORVU1Hr1G089830.1	Barley	cytosol	39.7	25.32
HORVU2Hr1G114340.4	Barley	endoplasmic reticulum, golgi	44.72	24.38
OQU85768	Sorghum	cytosol	43.22	23.96
KXG36979	Sorghum	plastid	43.72	23.26
TraesCS1A01G408800.1	Wheat	cytosol	39.2	23.01
VIT_00s0283g00070.t01	Wine grape	cytosol	35.68	22.68
Os07t0685800-01	Rice	plastid	41.21	21.98
VIT_05s0094g00770.t01	Wine grape	cytosol	32.16	21.55
HORVU2Hr1G017120.1	Barley	plastid	38.69	20.98
TraesCS2D01G099500.1	Wheat	plastid	39.2	20.74
TraesCS2A01G100000.2	Wheat	plastid	39.2	20.74
TraesCS2B01G117000.1	Wheat	plastid	39.2	20.69
TraesCS7A01G111500.1	Wheat	cytosol	22.61	20.27
Os02t0640600-00	Rice	mitochondrion	37.19	19.89
VIT_15s0046g03530.t01	Wine grape	cytosol	33.17	19.3
GSMUA_Achr5P12210_001	Banana	mitochondrion	47.24	15.31
HORVU5Hr1G031520.2	Barley	cytosol	20.6	14.64
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	52.76	14.13
HORVU5Hr1G031560.1	Barley	cytosol	3.02	4.72
Os04t0531750-00	Rice	mitochondrion	5.03	3.02
Os04t0531700-01	Rice	mitochondrion	1.51	2.75

Protein Annotations

EntrezGene:100266765	wikigene:100266765	Gene3D:3.40.50.720	MapMan:50.1.1	ProteinID:CCB58405	ProteinID:CCB58405.1
ncoils:Coil	UniProt:F6HUI2	EMBL:FN596251	EntrezGene:LOC100266765	wikigene:LOC100266765	InterPro:NAD(P)-bd_dom_sf
PRINTS:PR00081	PANTHER:PTHR43490	PANTHER:PTHR43490:SF40	InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI00021085E7
ArrayExpress:VIT_02s0025g04510	EnsemblPlantsGene:VIT_02s0025g04510	EnsemblPlants:VIT_02s0025g04510.t01	RefSeq:XP_003631392	RefSeq:XP_003631392.1	SEG:seg

Description

No Description!

Coordinates

chr2:+:4017715..4019467

Molecular Weight (calculated)

22751.5 Da

IEP (calculated)

8.959

GRAVY (calculated)

-0.317

Length

199 amino acids

Sequence
(BLAST)

001: MWFFITLIEK FEYYVKNNVD MLKEIMKRTY EKAEECIRTN YYGTQRVTQS LLPLLQLSPS SRIVNVSSLR GQLKNIHNHQ VKAELENVGE LTEEKLDKIL
101: QRFLRDFKED KLGANGWPVI ASAYKVSKAA VNAYTRIIAR KFPHFLVNYV HPGLVKTDST CNTGEMTAEE GGRAPVKLAL LPDGSPSGLY FHEMDVSTF

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.