Factsheet for TraesCS2A01G371200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G367600.2	Wheat	plastid	95.74	92.99
TraesCS2B01G388600.1	Wheat	cytosol, plastid	90.16	89.87
TraesCS2A01G371400.1	Wheat	cytosol, plastid	87.54	87.25
TraesCS7A01G114100.1	Wheat	cytosol	75.74	75.24
TraesCS2A01G371100.1	Wheat	cytosol	72.13	72.13
Os04t0531900-01	Rice	cytosol, plastid	70.82	70.36
Os04t0532400-01	Rice	cytosol	69.18	68.73
TraesCS7A01G111500.1	Wheat	cytosol	48.85	67.12
TraesCS2A01G371000.1	Wheat	cytosol	64.92	64.29
TraesCS2A01G371300.1	Wheat	cytosol	52.79	53.67
TraesCS2A01G516200.2	Wheat	mitochondrion	53.44	53.62
TraesCS2A01G370900.1	Wheat	cytosol	53.44	52.75
KRH40499	Soybean	cytosol	19.02	52.73
TraesCS2A01G371500.1	Wheat	plastid	56.39	51.34
KRH00691	Soybean	cytosol	41.64	49.8
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	48.2	49.49
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	48.2	49.49
KRH00696	Soybean	mitochondrion	47.54	49.32
KRH40500	Soybean	cytosol, nucleus	47.54	49.32
VIT_15s0046g03550.t01	Wine grape	cytosol	47.87	48.99
KRH48196	Soybean	cytosol	47.54	48.99
Bra032567.1-P	Field mustard	cytosol	18.69	48.72
VIT_06s0061g00670.t01	Wine grape	plastid	48.52	48.68
VIT_15s0046g03600.t01	Wine grape	cytosol	47.21	48.32
PGSC0003DMT400000067	Potato	golgi, peroxisome	45.9	48.11
Solyc01g099560.2.1	Tomato	cytosol	27.87	48.02
KRH48198	Soybean	cytosol	44.92	47.4
VIT_15s0046g03650.t01	Wine grape	cytosol	46.23	47.32
Solyc01g094210.2.1	Tomato	cytosol	45.9	47.14
TraesCS1A01G408800.1	Wheat	cytosol	52.13	46.9
PGSC0003DMT400048179	Potato	cytosol	45.9	46.82
PGSC0003DMT400048181	Potato	cytosol	45.9	46.82
Solyc11g071460.1.1	Tomato	cytosol	45.9	46.82
KRH65113	Soybean	cytosol	45.9	46.82
VIT_15s0046g03570.t01	Wine grape	plastid	45.57	46.8
VIT_02s0025g04510.t01	Wine grape	cytosol	30.49	46.73
VIT_06s0061g00640.t01	Wine grape	cytosol	46.56	46.71
KRH48194	Soybean	cytosol	45.25	46.31
KRH48206	Soybean	cytosol	45.9	45.9
TraesCS2A01G099800.1	Wheat	cytosol	47.21	45.86
KRH48202	Soybean	cytosol	44.92	45.82
PGSC0003DMT400088659	Potato	cytosol	17.7	45.76
KRH65114	Soybean	cytosol	43.93	45.58
Bra032573.1-P	Field mustard	cytosol	20.0	45.52
Bra007585.1-P	Field mustard	cytosol	43.93	45.27
CDY48937	Canola	cytosol	43.93	45.27
PGSC0003DMT400047834	Potato	cytosol	44.26	45.15
Bra014448.1-P	Field mustard	cytosol	43.93	45.12
CDX71758	Canola	cytosol	43.61	44.93
CDX89104	Canola	cytosol	40.33	44.57
Solyc01g094220.2.1	Tomato	cytosol	43.61	44.33
PGSC0003DMT400000078	Potato	cytosol	43.61	44.33
KRH17659	Soybean	cytosol	14.1	43.88
AT1G01800.1	Thale cress	cytosol	42.3	43.73
AT2G24190.2	Thale cress	cytosol	42.62	43.19
CDY56927	Canola	endoplasmic reticulum, golgi	43.28	43.14
KRH65115	Soybean	cytosol	45.25	42.46
Solyc01g094270.2.1	Tomato	cytosol, plastid	43.61	42.22
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	42.3	42.16
Solyc01g094240.2.1	Tomato	cytosol	43.61	41.82
CDY15148	Canola	cytosol	40.0	41.36
CDX90062	Canola	cytosol	40.0	41.36
Bra033230.1-P	Field mustard	cytosol	40.0	41.36
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	43.93	40.98
TraesCS2A01G353500.1	Wheat	peroxisome	39.02	40.75
Solyc01g094260.2.1	Tomato	cytosol	42.62	40.75
Solyc01g094250.2.1	Tomato	cytosol	42.62	40.75
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	16.72	40.16
PGSC0003DMT400026580	Potato	cytosol	40.66	40.0
Solyc10g017570.2.1	Tomato	cytosol	40.33	39.68
TraesCS6A01G218000.1	Wheat	peroxisome	37.38	39.04
VIT_06s0009g01450.t01	Wine grape	plastid	31.48	38.1
TraesCS2A01G100000.2	Wheat	plastid	46.56	37.77
Solyc11g042710.1.1	Tomato	cytosol	18.69	36.08
KRH40504	Soybean	endoplasmic reticulum	45.57	35.64
TraesCS3A01G444300.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	33.11	31.37
VIT_15s0046g03530.t01	Wine grape	cytosol	22.95	20.47
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	47.87	19.65

Protein Annotations

EnsemblPlants:TraesCS2A01G371200.1	EnsemblPlantsGene:TraesCS2A01G371200	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	ncoils:Coil
PANTHER:PTHR43490	PANTHER:PTHR43490:SF19	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
SUPFAM:SSF51735	MapMan:50.1.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:613699384..613700800

Molecular Weight (calculated)

33051.5 Da

IEP (calculated)

5.668

GRAVY (calculated)

-0.151

Length

305 amino acids

Sequence
(BLAST)

001: MEGIIPSQPN TRVAVVTGGN KGIGFEVCRQ LASGGITVVL TAQDETRGGE AAERLKALGL SGVVFHRLEI TDASGAATLA GFLEARFGKL DILVNNAAVC
101: GVECGQEFDI NEEKFAGLDF HQRVEWMLKN ARETIDSAKN TVQTNYYGTK HVIEALLPLL QASSEGRIVN VSSNYGLLRH IGNEEVRQEL NDVDNLTQGR
201: LDELLEKFIK DFEAGALEMH GWPTKFSAYK VAKAAMNAYT RILARRHPEL RVNCAHPGFV KTDMSMGFGV LTPEEGARNL AKVTLLPGGG PTGAYFAQGE
301: EAPFV

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.