Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 2
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G436600.1 | Wheat | cytosol | 96.58 | 96.58 |
| TraesCS3B01G477700.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome | 96.27 | 96.57 |
| HORVU3Hr1G096690.3 | Barley | cytosol | 93.17 | 93.17 |
| Os01t0929500-01 | Rice | cytosol | 83.54 | 81.52 |
| EES04148 | Sorghum | cytosol | 81.68 | 81.17 |
| Zm00001d042250_P001 | Maize | cytosol | 79.5 | 79.01 |
| GSMUA_Achr4P15900_001 | Banana | cytosol | 66.15 | 67.41 |
| VIT_00s0283g00070.t01 | Wine grape | cytosol | 60.87 | 62.62 |
| PGSC0003DMT400065718 | Potato | cytosol, mitochondrion | 52.17 | 60.87 |
| Solyc06g068740.2.1 | Tomato | cytosol | 58.39 | 60.06 |
| KRH38194 | Soybean | cytosol | 57.76 | 59.42 |
| Bra019617.1-P | Field mustard | cytosol | 57.45 | 58.54 |
| CDY00233 | Canola | cytosol | 57.45 | 58.54 |
| CDY53157 | Canola | cytosol | 57.45 | 58.54 |
| KRH41047 | Soybean | cytosol | 56.52 | 57.96 |
| AT5G61830.1 | Thale cress | cytosol | 56.83 | 57.91 |
| PGSC0003DMT400036929 | Potato | cytoskeleton, cytosol, nucleus | 56.21 | 57.83 |
| Solyc03g118100.2.1 | Tomato | cytoskeleton, cytosol, nucleus | 56.21 | 57.83 |
| Solyc12g042370.1.1 | Tomato | cytosol | 56.21 | 57.46 |
| KRH59720 | Soybean | cytosol | 55.9 | 57.32 |
| PGSC0003DMT400037433 | Potato | cytosol | 55.9 | 57.14 |
| KRH63893 | Soybean | cytosol | 54.66 | 56.05 |
| KRG94236 | Soybean | plastid | 53.42 | 55.84 |
| Bra022746.1-P | Field mustard | cytosol | 53.42 | 55.48 |
| CDX84895 | Canola | cytosol | 53.42 | 55.48 |
| CDY45793 | Canola | cytosol | 53.42 | 55.48 |
| AT5G51030.1 | Thale cress | cytosol | 53.73 | 55.1 |
| KRH54068 | Soybean | cytosol | 53.11 | 50.89 |
| TraesCS2A01G353500.1 | Wheat | peroxisome | 42.55 | 46.92 |
| TraesCS6A01G218000.1 | Wheat | peroxisome | 40.99 | 45.21 |
| KRH00830 | Soybean | cytosol | 15.84 | 42.15 |
| TraesCS2A01G370900.1 | Wheat | cytosol | 34.47 | 35.92 |
| TraesCS2A01G371100.1 | Wheat | cytosol | 33.54 | 35.41 |
| TraesCS7A01G114100.1 | Wheat | cytosol | 33.54 | 35.18 |
| TraesCS2A01G371400.1 | Wheat | cytosol, plastid | 32.92 | 34.64 |
| TraesCS2A01G371000.1 | Wheat | cytosol | 32.92 | 34.42 |
| TraesCS2A01G516200.2 | Wheat | mitochondrion | 32.3 | 34.21 |
| TraesCS7A01G111500.1 | Wheat | cytosol | 23.29 | 33.78 |
| TraesCS2A01G371200.1 | Wheat | cytosol | 31.37 | 33.11 |
| TraesCS2A01G371300.1 | Wheat | cytosol | 30.43 | 32.67 |
| TraesCS2A01G099800.1 | Wheat | cytosol | 31.68 | 32.48 |
| TraesCS1A01G408800.1 | Wheat | cytosol | 33.85 | 32.15 |
| TraesCS2A01G371500.1 | Wheat | plastid | 32.92 | 31.64 |
| TraesCS2A01G100000.2 | Wheat | plastid | 32.3 | 27.66 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G444300.1 | EnsemblPlantsGene:TraesCS3A01G444300 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR43490 |
| PANTHER:PTHR43490:SF54 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SUPFAM:SSF51735 | TIGR:cd05324 | MapMan:50.1.1 | : | : | : |
Description
No Description!
Coordinates
chr3A:-:686121536..686122994
Molecular Weight (calculated)
35993.8 Da
IEP (calculated)
8.760
GRAVY (calculated)
-0.376
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKRGKAAAR ERREERRREV TLLRAVPYEP HQRWWDGLAP ARAVAVVTGA SRGIGYEISR QLAHHGLHVV LASRDAARGR DAAESILREQ EAASAEWRQL
101: DVADAASVEA FAAWTARTHG GIHVLINNAG VNFNRGADNS VEFAEQVIET NYFGTKRMIE AMLPLLKPSP YGGRIVNVSS RLGRANGRRN KIGDAILREQ
201: LLTDDCLSEE LIDGMVTKFL EQVKQNSWSS IEWPQMYTDY SISKLAVNVY TRLMAKRLAD RSEGQKIYIN CFCPGWVKTA MTDWEGNISA EEGADTGVWL
301: ALLPQAQATI GKFYAERREI SF
101: DVADAASVEA FAAWTARTHG GIHVLINNAG VNFNRGADNS VEFAEQVIET NYFGTKRMIE AMLPLLKPSP YGGRIVNVSS RLGRANGRRN KIGDAILREQ
201: LLTDDCLSEE LIDGMVTKFL EQVKQNSWSS IEWPQMYTDY SISKLAVNVY TRLMAKRLAD RSEGQKIYIN CFCPGWVKTA MTDWEGNISA EEGADTGVWL
301: ALLPQAQATI GKFYAERREI SF
001: MTNKEKARER REKRMQEISL LRTIPYSDHH RWWSCENVAV VTGSNRGIGF EIARQLAVHG LTVVLTARNV NAGLEAVKSL RHQEEGLKVY FHQLDVTDSS
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF
101: SIREFGCWLK QTFGGLDILV NNAGVNYNLG SDNTVEFAET VISTNYQGTK NMTKAMIPLM RPSPHGARVV NVSSRLGRVN GRRNRLANVE LRDQLSSPDL
201: LTEELIDRTV SKFINQVKDG TWESGGWPQT FTDYSMSKLA VNAYTRLMAK ELERRGEEEK IYVNSFCPGW VKTAMTGYAG NMPPEDAADT GVWLSLVLSE
301: EAVTGKFFAE RREINF
Arabidopsis Description
At5g61830 [Source:UniProtKB/TrEMBL;Acc:Q501A2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.