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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • plastid 1
  • mitochondrion 2
  • cytoskeleton 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX84895 Canola cytosol 100.0 100.0
AT5G51030.1 Thale cress cytosol 93.55 92.36
KRH00830 Soybean cytosol 27.42 70.25
KRH59720 Soybean cytosol 70.65 69.75
KRH41047 Soybean cytosol 70.32 69.43
KRH63893 Soybean cytosol 69.03 68.15
Solyc12g042370.1.1 Tomato cytosol 69.03 67.94
PGSC0003DMT400036929 Potato cytoskeleton, cytosol, nucleus 68.39 67.73
VIT_00s0283g00070.t01 Wine grape cytosol 68.39 67.73
PGSC0003DMT400037433 Potato cytosol 68.39 67.3
Solyc03g118100.2.1 Tomato cytoskeleton, cytosol, nucleus 67.74 67.09
PGSC0003DMT400065718 Potato cytosol, mitochondrion 59.03 66.3
Solyc06g068740.2.1 Tomato cytosol 65.81 65.18
Bra019617.1-P Field mustard cytosol 66.13 64.87
KRH38194 Soybean cytosol 64.19 63.58
KRH54068 Soybean cytosol 68.39 63.1
KRG94236 Soybean plastid 58.06 58.44
GSMUA_Achr4P15900_001 Banana cytosol 58.71 57.59
Zm00001d042250_P001 Maize cytosol 57.1 54.63
EES04148 Sorghum cytosol 57.1 54.63
TraesCS3D01G436600.1 Wheat cytosol 56.13 54.04
TraesCS3B01G477700.1 Wheat cytosol, mitochondrion, nucleus, peroxisome 55.48 53.58
TraesCS3A01G444300.1 Wheat cytosol, mitochondrion, nucleus, peroxisome 55.48 53.42
HORVU3Hr1G096690.3 Barley cytosol 55.16 53.11
Os01t0929500-01 Rice cytosol 56.45 53.03
Bra007472.1-P Field mustard cytosol, peroxisome, plastid 43.23 45.89
Bra032567.1-P Field mustard cytosol 16.77 44.44
Bra032573.1-P Field mustard cytosol 17.74 41.04
Bra033230.1-P Field mustard cytosol 38.06 40.0
Bra007585.1-P Field mustard cytosol 38.06 39.86
Bra014448.1-P Field mustard cytosol 37.74 39.39
Protein Annotations
EnsemblPlants:Bra022746.1EnsemblPlants:Bra022746.1-PEnsemblPlantsGene:Bra022746Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom_sfInterPro:SDR_fam
PANTHER:PTHR43490PANTHER:PTHR43490:SF54PFAM:PF00106PRINTS:PR00080PRINTS:PR00081SUPFAM:SSF51735
UniParc:UPI0002540167UniProt:M4E1U6MapMan:50.1.1:::
Description
AT5G51030 (E=2e-168) | short-chain dehydrogenase/reductase (SDR) family protein
Coordinates
chrA03:+:6801745..6803126
Molecular Weight (calculated)
34591.1 Da
IEP (calculated)
6.178
GRAVY (calculated)
-0.296
Length
310 amino acids
Sequence
(BLAST)
001: MVGSKEKRDK RLQQVSLLRT IPYSDHQRWW TSETVAVVTG ANRGIGFEMV KQLAGHGLTV ILTSRDENVG VEAAKVLQEG GFNVDFHRLD ILDTSSIQDF
101: CQWIKEKYGF IDVLINNAGV NYNVGTHNSV EYSHMVISTN YNGTKNIIKA MIPLMRQASP GARIVNVTSR LGRLKGRHSK LENEAVRAKL MDVDSLTEEI
201: IDETVSEFLN QVEEGTWESG GWPHSFTDYS VSKMAVNAYT RVLAKELSER PEGEKIYANC FCPGWVKTAM TGYAGNISAE DGADTGVWLA LLPDQAITGK
301: FFAERREISF
Best Arabidopsis Sequence Match ( AT5G51030.1 )
(BLAST)
001: MVGSKEKSKE KRDKRLQEIS LLRTIPYSDH QRWWTSETVA VVTGANRGIG FEMVRQLAGH GLTVILTSRD ENVGVEAAKI LQEGGFNVDF HRLDILDSSS
101: IQEFCEWIKE KYGFIDVLIN NAGVNYNVGS DNSVEFSHMV ISTNYYGTKN IINAMIPLMR HACQGARIVN VTSRLGRLKG RHSKLENEDV RAKLMDVDSL
201: TEEIVDKTVS EFLKQVEEGT WESGGWPHSF TDYSVSKMAV NAYTRVLAKE LSERPEGEKI YANCFCPGWV KTAMTGYAGN VSAEDGADTG VWLALLPDQA
301: ITGKFFAERR EISF
Arabidopsis Description
At5g51030 [Source:UniProtKB/TrEMBL;Acc:Q9FI45]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.