Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 5
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0061g00640.t01 | Wine grape | cytosol | 82.89 | 82.89 |
| VIT_15s0046g03600.t01 | Wine grape | cytosol | 54.93 | 56.04 |
| VIT_15s0046g03590.t01 | Wine grape | cytosol, peroxisome, plastid | 54.61 | 55.89 |
| VIT_15s0046g03580.t01 | Wine grape | cytosol, peroxisome, plastid | 54.28 | 55.56 |
| VIT_15s0046g03570.t01 | Wine grape | plastid | 53.95 | 55.22 |
| VIT_15s0046g03550.t01 | Wine grape | cytosol | 53.29 | 54.36 |
| VIT_15s0046g03650.t01 | Wine grape | cytosol | 53.29 | 54.36 |
| TraesCS2A01G516200.2 | Wheat | mitochondrion | 52.63 | 52.63 |
| TraesCS2D01G517700.1 | Wheat | cytosol | 52.3 | 51.62 |
| TraesCS2B01G544800.1 | Wheat | cytosol | 51.97 | 51.3 |
| VIT_02s0025g04510.t01 | Wine grape | cytosol | 33.55 | 51.26 |
| EES07551 | Sorghum | cytosol | 50.99 | 51.16 |
| TraesCS2A01G371100.1 | Wheat | cytosol | 50.99 | 50.82 |
| KXG26779 | Sorghum | cytosol | 51.97 | 50.8 |
| Os04t0532100-01 | Rice | cytosol | 50.66 | 49.84 |
| Os04t0531700-01 | Rice | mitochondrion | 17.76 | 49.54 |
| KXG31187 | Sorghum | mitochondrion | 48.36 | 49.49 |
| EES07552 | Sorghum | cytosol | 50.0 | 49.35 |
| KXG31133 | Sorghum | cytosol | 47.04 | 49.31 |
| TraesCS2A01G370900.1 | Wheat | cytosol | 50.0 | 49.19 |
| TraesCS2D01G367200.1 | Wheat | cytosol | 50.0 | 49.19 |
| Os04t0531900-01 | Rice | cytosol, plastid | 49.67 | 49.19 |
| EES11175 | Sorghum | cytosol, plastid | 48.36 | 49.16 |
| EES11174 | Sorghum | cytosol | 50.0 | 49.03 |
| TraesCS2A01G371400.1 | Wheat | cytosol, plastid | 49.34 | 49.02 |
| TraesCS2B01G388600.1 | Wheat | cytosol, plastid | 49.34 | 49.02 |
| EES07553 | Sorghum | cytosol | 49.67 | 48.87 |
| EES11171 | Sorghum | cytosol | 49.67 | 48.55 |
| TraesCS2D01G367700.1 | Wheat | mitochondrion | 49.34 | 48.54 |
| Os04t0532400-01 | Rice | cytosol | 49.01 | 48.53 |
| TraesCS2A01G371200.1 | Wheat | cytosol | 48.68 | 48.52 |
| OQU82017 | Sorghum | extracellular | 26.32 | 48.48 |
| EES11167 | Sorghum | cytosol | 49.34 | 48.39 |
| HORVU7Hr1G024270.5 | Barley | cytosol | 48.68 | 48.21 |
| TraesCS2B01G388200.2 | Wheat | cytosol | 42.76 | 48.15 |
| TraesCS2A01G371000.1 | Wheat | cytosol | 48.68 | 48.05 |
| TraesCS7A01G114100.1 | Wheat | cytosol | 48.36 | 47.88 |
| EER93229 | Sorghum | cytosol | 49.01 | 47.45 |
| TraesCS2B01G388300.1 | Wheat | cytosol | 48.68 | 47.44 |
| HORVU1Hr1G064390.1 | Barley | cytosol | 48.36 | 47.42 |
| HORVU5Hr1G031560.1 | Barley | cytosol | 19.74 | 47.24 |
| EES11173 | Sorghum | cytosol | 48.03 | 46.95 |
| TraesCS1D01G415900.1 | Wheat | cytosol | 48.03 | 46.79 |
| TraesCS2B01G388700.1 | Wheat | cytosol, plastid | 47.04 | 46.73 |
| TraesCS2B01G388100.1 | Wheat | cytosol | 48.36 | 46.67 |
| TraesCS2D01G367600.2 | Wheat | plastid | 48.03 | 46.5 |
| TraesCS2B01G116700.1 | Wheat | mitochondrion | 48.03 | 46.5 |
| TraesCS2D01G367800.1 | Wheat | cytosol, plastid | 46.71 | 46.41 |
| EES07554 | Sorghum | cytosol | 46.71 | 46.1 |
| HORVU2Hr1G091460.1 | Barley | cytosol, mitochondrion, plastid | 47.37 | 45.86 |
| TraesCS2D01G099300.1 | Wheat | cytosol | 47.37 | 45.86 |
| TraesCS2A01G099800.1 | Wheat | cytosol | 47.37 | 45.86 |
| HORVU1Hr1G089830.1 | Barley | cytosol | 47.04 | 45.83 |
| TraesCS1B01G437500.1 | Wheat | cytosol | 47.04 | 45.83 |
| TraesCS7A01G111500.1 | Wheat | cytosol | 33.22 | 45.5 |
| HORVU2Hr1G091430.7 | Barley | cytosol | 46.71 | 45.37 |
| EES09734 | Sorghum | cytosol | 45.39 | 44.37 |
| EER97757 | Sorghum | cytosol | 48.03 | 44.11 |
| TraesCS2A01G371300.1 | Wheat | cytosol | 43.42 | 44.0 |
| HORVU2Hr1G114340.4 | Barley | endoplasmic reticulum, golgi | 51.97 | 43.29 |
| OQU85768 | Sorghum | cytosol | 50.33 | 42.62 |
| TraesCS2D01G367400.1 | Wheat | plastid | 48.68 | 42.53 |
| TraesCS1A01G408800.1 | Wheat | cytosol | 47.37 | 42.48 |
| VIT_06s0009g01450.t01 | Wine grape | plastid | 35.2 | 42.46 |
| TraesCS2A01G371500.1 | Wheat | plastid | 46.71 | 42.39 |
| HORVU2Hr1G091440.3 | Barley | mitochondrion | 48.68 | 41.57 |
| EES17690 | Sorghum | cytosol | 22.37 | 40.72 |
| VIT_00s0283g00070.t01 | Wine grape | cytosol | 41.12 | 39.94 |
| TraesCS2D01G099500.1 | Wheat | plastid | 48.68 | 39.36 |
| Os07t0685800-01 | Rice | plastid | 48.03 | 39.14 |
| TraesCS2A01G100000.2 | Wheat | plastid | 48.36 | 39.1 |
| HORVU2Hr1G017120.1 | Barley | plastid | 47.04 | 38.96 |
| TraesCS2B01G117000.1 | Wheat | plastid | 48.03 | 38.73 |
| VIT_05s0094g00770.t01 | Wine grape | cytosol | 37.83 | 38.72 |
| TraesCS2B01G388500.1 | Wheat | cytosol, mitochondrion, nucleus | 20.07 | 38.36 |
| KXG36979 | Sorghum | plastid | 46.05 | 37.43 |
| VIT_06s0061g00620.t01 | Wine grape | mitochondrion, plastid | 88.49 | 36.2 |
| HORVU5Hr1G031520.2 | Barley | cytosol | 30.59 | 33.21 |
| Os02t0640600-00 | Rice | mitochondrion | 40.13 | 32.8 |
| VIT_15s0046g03530.t01 | Wine grape | cytosol | 25.66 | 22.81 |
| Os04t0531750-00 | Rice | mitochondrion | 3.29 | 3.02 |
Protein Annotations
| EntrezGene:100246450 | wikigene:100246450 | Gene3D:3.40.50.720 | MapMan:50.1.1 | EMBL:AM440450 | ProteinID:CAN76198 |
| ProteinID:CAN76198.1 | ProteinID:CBI17140 | ProteinID:CBI17140.3 | UniProt:D7SNB1 | EMBL:FN594957 | EntrezGene:LOC100246450 |
| wikigene:LOC100246450 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PFAM:PF13561 | PRINTS:PR00080 | PRINTS:PR00081 |
| PANTHER:PTHR43490 | PANTHER:PTHR43490:SF57 | InterPro:SDR_fam | SUPFAM:SSF51735 | TIGR:TC65004 | UniParc:UPI0001BE0F12 |
| ArrayExpress:VIT_06s0061g00670 | EnsemblPlantsGene:VIT_06s0061g00670 | EnsemblPlants:VIT_06s0061g00670.t01 | unigene:Vvi.370 | RefSeq:XP_002272764 | RefSeq:XP_002272764.2 |
| RefSeq:XP_003632271 | RefSeq:XP_003632271.1 | RefSeq:XP_010651769.1 | : | : | : |
Description
No Description!
Coordinates
chr6:+:18179439..18181407
Molecular Weight (calculated)
32990.6 Da
IEP (calculated)
5.223
GRAVY (calculated)
0.045
Length
304 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTISDSAT MRCALVTGAS KGIGLEICRQ LASNGVMVVL TARDEKRGLE AVAKLHESSL SNVVFHQLEV MDAKSITTLA KFIVTRYGKL DILVNNAGVS
101: GAITDWEAFK TLYLEDSKNN TNVAELLNKA SKETYGLAEE CVKTNYYGTK GVTEALFPCL LLSNSGRIVN VSSSLGSLQF VSNERVRMEL NDVDVLSVER
201: LDEIVNEFLN DVKEDRLHDR GWPTQTSAYT ISKAAVNAYT RIVAKSYPSL LINCVCPGFV KTDINSNTGF FPVEVGAKGA VMLALLPEGG PSGLFFEKME
301: ASTF
101: GAITDWEAFK TLYLEDSKNN TNVAELLNKA SKETYGLAEE CVKTNYYGTK GVTEALFPCL LLSNSGRIVN VSSSLGSLQF VSNERVRMEL NDVDVLSVER
201: LDEIVNEFLN DVKEDRLHDR GWPTQTSAYT ISKAAVNAYT RIVAKSYPSL LINCVCPGFV KTDINSNTGF FPVEVGAKGA VMLALLPEGG PSGLFFEKME
301: ASTF
001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF
Arabidopsis Description
AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.