Factsheet for TraesCS2D01G367400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G388300.1	Wheat	cytosol	86.78	96.79
TraesCS2A01G371000.1	Wheat	cytosol	83.91	94.81
HORVU5Hr1G031560.1	Barley	cytosol	33.05	90.55
HORVU2Hr1G091440.3	Barley	mitochondrion	83.33	81.46
TraesCS2D01G367700.1	Wheat	mitochondrion	57.47	64.72
TraesCS2D01G367600.2	Wheat	plastid	58.33	64.65
TraesCS2D01G367800.1	Wheat	cytosol, plastid	51.44	58.5
TraesCS2D01G517700.1	Wheat	cytosol	51.15	57.79
TraesCS2D01G367200.1	Wheat	cytosol	47.7	53.72
KRH40499	Soybean	cytosol	16.95	53.64
VIT_15s0046g03550.t01	Wine grape	cytosol	45.4	53.02
VIT_15s0046g03650.t01	Wine grape	cytosol	45.11	52.68
VIT_15s0046g03600.t01	Wine grape	cytosol	45.11	52.68
KRH48198	Soybean	cytosol	43.68	52.6
TraesCS1D01G415900.1	Wheat	cytosol	47.13	52.56
KRH48196	Soybean	cytosol	43.68	51.35
VIT_15s0046g03570.t01	Wine grape	plastid	43.68	51.18
PGSC0003DMT400000067	Potato	golgi, peroxisome	42.53	50.86
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	43.39	50.84
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	43.39	50.84
KRH00696	Soybean	mitochondrion	42.82	50.68
KRH48194	Soybean	cytosol	43.39	50.67
KRH65113	Soybean	cytosol	43.39	50.5
KRH48206	Soybean	cytosol	44.25	50.49
KRH40500	Soybean	cytosol, nucleus	42.53	50.34
KRH48202	Soybean	cytosol	43.1	50.17
KRH00691	Soybean	cytosol	36.49	49.8
Solyc01g094220.2.1	Tomato	cytosol	42.53	49.33
Solyc01g094210.2.1	Tomato	cytosol	41.95	49.16
VIT_06s0061g00670.t01	Wine grape	plastid	42.53	48.68
Solyc01g099560.2.1	Tomato	cytosol	24.71	48.59
PGSC0003DMT400000078	Potato	cytosol	41.67	48.33
PGSC0003DMT400088659	Potato	cytosol	16.38	48.31
KRH65114	Soybean	cytosol	40.8	48.3
VIT_02s0025g04510.t01	Wine grape	cytosol	27.59	48.24
Solyc11g071460.1.1	Tomato	cytosol	41.38	48.16
PGSC0003DMT400048181	Potato	cytosol	41.09	47.83
VIT_06s0061g00640.t01	Wine grape	cytosol	41.67	47.7
PGSC0003DMT400048179	Potato	cytosol	40.8	47.49
TraesCS2D01G099300.1	Wheat	cytosol	42.82	47.45
Bra032567.1-P	Field mustard	cytosol	15.8	47.01
KRH17659	Soybean	cytosol	13.22	46.94
Bra007585.1-P	Field mustard	cytosol	39.66	46.62
CDX71758	Canola	cytosol	39.66	46.62
CDY48937	Canola	cytosol	39.66	46.62
Bra014448.1-P	Field mustard	cytosol	39.37	46.13
KRH65115	Soybean	cytosol	42.82	45.85
PGSC0003DMT400047834	Potato	cytosol	39.37	45.82
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	39.94	45.42
CDX89104	Canola	cytosol	35.92	45.29
AT1G01800.1	Thale cress	cytosol	38.22	45.08
Solyc01g094270.2.1	Tomato	cytosol, plastid	40.52	44.76
AT2G24190.2	Thale cress	cytosol	38.22	44.19
CDY56927	Canola	endoplasmic reticulum, golgi	38.79	44.12
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	16.09	44.09
Bra032573.1-P	Field mustard	cytosol	16.95	44.03
Solyc01g094260.2.1	Tomato	cytosol	39.94	43.57
Solyc01g094240.2.1	Tomato	cytosol	39.66	43.4
Bra033230.1-P	Field mustard	cytosol	36.78	43.39
Solyc01g094250.2.1	Tomato	cytosol	39.66	43.26
CDY15148	Canola	cytosol	36.49	43.05
CDX90062	Canola	cytosol	36.49	43.05
PGSC0003DMT400026580	Potato	cytosol	38.22	42.9
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	40.23	42.81
VIT_06s0009g01450.t01	Wine grape	plastid	30.75	42.46
Solyc10g017570.2.1	Tomato	cytosol	37.64	42.26
TraesCS2D01G350600.1	Wheat	peroxisome	33.33	39.73
TraesCS2D01G099500.1	Wheat	plastid	42.53	39.36
TraesCS6D01G200400.1	Wheat	peroxisome	32.76	39.04
KRH40504	Soybean	endoplasmic reticulum	42.24	37.69
TraesCS3D01G436600.1	Wheat	cytosol	31.32	33.85
Solyc11g042710.1.1	Tomato	cytosol	13.79	30.38
VIT_15s0046g03530.t01	Wine grape	cytosol	20.98	21.34
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	43.68	20.46

Protein Annotations

EnsemblPlants:TraesCS2D01G367400.1	EnsemblPlantsGene:TraesCS2D01G367400	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490	PANTHER:PTHR43490:SF26
PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SUPFAM:SSF51735	MapMan:50.1.1	:

Description

No Description!

Coordinates

chr2D:-:472129948..472132000

Molecular Weight (calculated)

38126.3 Da

IEP (calculated)

7.595

GRAVY (calculated)

-0.333

Length

348 amino acids

Sequence
(BLAST)

001: MEGATPTSAP SSTRIAVVTG GSKGIGLEAC KQLAGGGAIT VVLTARNETR GTAAVEQIKR LGHADVIFHQ LDITDASSIA RLADFLKTRF GKLDILVNNA
101: ATDGIEHVID PVYGLTPGDE TFNGMDAGQR INWMWTSCRQ TYETAKQGLQ TNYYGTKRVT EALLPLLRSS SDGRIVNVSS NFGLLSVSIM RRSPRTTNKF
201: LQQQQKRGHD SMPTFFLPFR PQFFRNEELK QELNDVDSLT EERLDELLAM FLKDFEAGGA EARGWPAEFS AYKVAKAAMN AYSRILAKRH PELRVNCAHP
301: GYVKTDITRN SGILTPEEGA RNITSVALLP EGGPTGKYFS EGEEASFV

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.