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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi

Predictor Summary:
  • cytosol 1
  • mitochondrion 2
  • peroxisome 1
  • plastid 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome
Any Predictor:cytosol, golgi, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:mitochondrion
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g099560.2.1 Tomato cytosol 57.39 94.35
Solyc01g094210.2.1 Tomato cytosol 92.1 90.24
PGSC0003DMT400000078 Potato cytosol 57.39 55.67
KRH40500 Soybean cytosol, nucleus 54.98 54.42
PGSC0003DMT400088659 Potato cytosol 21.99 54.24
OQU82017 Sorghum extracellular 30.58 53.94
AT2G24190.2 Thale cress cytosol 54.98 53.16
Bra032567.1-P Field mustard cytosol 21.31 52.99
PGSC0003DMT400000080 Potato cytosol, mitochondrion, plastid 55.33 52.61
AT1G01800.1 Thale cress cytosol 53.26 52.54
CDX71758 Canola cytosol 53.26 52.36
Bra033230.1-P Field mustard cytosol 52.92 52.2
CDY15148 Canola cytosol 52.92 52.2
CDY48937 Canola cytosol 52.92 52.03
Bra007585.1-P Field mustard cytosol 52.92 52.03
CDX90062 Canola cytosol 52.58 51.86
Bra014448.1-P Field mustard cytosol 52.92 51.85
KRH65114 Soybean cytosol 51.89 51.36
CDX89104 Canola cytosol 48.45 51.09
HORVU5Hr1G031560.1 Barley cytosol 21.99 50.39
CDY56927 Canola endoplasmic reticulum, golgi 52.58 50.0
Bra032573.1-P Field mustard cytosol 23.02 50.0
Os04t0532400-01 Rice cytosol 52.58 49.84
AT3G61220.3 Thale cress endoplasmic reticulum, vacuole 55.67 49.54
Os04t0531900-01 Rice cytosol, plastid 52.23 49.51
EES11175 Sorghum cytosol, plastid 50.86 49.5
TraesCS2A01G371100.1 Wheat cytosol 51.2 48.85
TraesCS2D01G367800.1 Wheat cytosol, plastid 51.2 48.69
Os04t0532100-01 Rice cytosol 51.55 48.54
TraesCS7A01G114100.1 Wheat cytosol 50.86 48.21
TraesCS2B01G388300.1 Wheat cytosol 51.55 48.08
TraesCS2B01G388700.1 Wheat cytosol, plastid 50.52 48.04
EES07552 Sorghum cytosol 50.52 47.73
EES11171 Sorghum cytosol 50.86 47.59
EES11174 Sorghum cytosol 50.52 47.42
PGSC0003DMT400026580 Potato cytosol 50.52 47.42
EES11173 Sorghum cytosol 50.52 47.27
HORVU7Hr1G024270.5 Barley cytosol 49.83 47.23
HORVU1Hr1G064390.1 Barley cytosol 50.17 47.1
TraesCS2A01G371000.1 Wheat cytosol 49.83 47.08
TraesCS2B01G388600.1 Wheat cytosol, plastid 49.48 47.06
TraesCS2A01G371400.1 Wheat cytosol, plastid 49.48 47.06
TraesCS2D01G367700.1 Wheat mitochondrion 49.83 46.93
PGSC0003DMT400048181 Potato cytosol 48.11 46.82
PGSC0003DMT400048179 Potato cytosol 48.11 46.82
Os04t0531700-01 Rice mitochondrion 17.53 46.79
TraesCS2A01G371300.1 Wheat cytosol 48.11 46.67
KXG31133 Sorghum cytosol 46.39 46.55
HORVU2Hr1G091430.7 Barley cytosol 49.83 46.33
TraesCS2B01G388200.2 Wheat cytosol 42.96 46.3
PGSC0003DMT400047834 Potato cytosol 47.42 46.15
EES11167 Sorghum cytosol 49.14 46.13
TraesCS2A01G516200.2 Wheat mitochondrion 48.11 46.05
TraesCS2A01G370900.1 Wheat cytosol 48.8 45.95
TraesCS2A01G371200.1 Wheat cytosol 48.11 45.9
EES07551 Sorghum cytosol 47.77 45.87
TraesCS2D01G517700.1 Wheat cytosol 48.45 45.78
EES07553 Sorghum cytosol 48.45 45.63
KXG31187 Sorghum mitochondrion 46.39 45.45
TraesCS2B01G544800.1 Wheat cytosol 48.11 45.45
TraesCS2D01G367200.1 Wheat cytosol 48.11 45.31
GSMUA_Achr5P12200_001 Banana cytosol 48.8 45.08
TraesCS2D01G367600.2 Wheat plastid 48.11 44.59
TraesCS2B01G388100.1 Wheat cytosol 47.77 44.13
EES09734 Sorghum cytosol 47.08 44.05
KXG26779 Sorghum cytosol 47.08 44.05
TraesCS2A01G371500.1 Wheat plastid 50.52 43.88
TraesCS7A01G111500.1 Wheat cytosol 33.33 43.69
EER93229 Sorghum cytosol 47.08 43.63
EES07554 Sorghum cytosol 45.7 43.18
TraesCS2A01G099800.1 Wheat cytosol 46.39 42.99
TraesCS2B01G116700.1 Wheat mitochondrion 46.39 42.99
TraesCS2D01G099300.1 Wheat cytosol 46.05 42.68
HORVU2Hr1G091460.1 Barley cytosol, mitochondrion, plastid 46.05 42.68
TraesCS1D01G415900.1 Wheat cytosol 45.7 42.63
TraesCS2D01G367400.1 Wheat plastid 50.86 42.53
EER97757 Sorghum cytosol 48.11 42.3
HORVU2Hr1G091440.3 Barley mitochondrion 51.2 41.85
HORVU1Hr1G089830.1 Barley cytosol 44.33 41.35
TraesCS1B01G437500.1 Wheat cytosol 43.99 41.03
PGSC0003DMT400048175 Potato cytosol, peroxisome, plastid 17.87 40.94
PGSC0003DMT400065718 Potato cytosol, mitochondrion 37.11 39.13
TraesCS2B01G388500.1 Wheat cytosol, mitochondrion, nucleus 21.31 38.99
EES17690 Sorghum cytosol 22.34 38.92
HORVU2Hr1G114340.4 Barley endoplasmic reticulum, golgi 48.45 38.63
OQU85768 Sorghum cytosol 47.42 38.44
TraesCS1A01G408800.1 Wheat cytosol 43.99 37.76
Os07t0685800-01 Rice plastid 47.42 37.0
PGSC0003DMT400036929 Potato cytoskeleton, cytosol, nucleus 39.52 36.74
TraesCS2A01G100000.2 Wheat plastid 45.36 35.11
PGSC0003DMT400037433 Potato cytosol 37.8 34.92
HORVU2Hr1G017120.1 Barley plastid 43.99 34.88
TraesCS2D01G099500.1 Wheat plastid 45.02 34.84
TraesCS2B01G117000.1 Wheat plastid 45.02 34.75
HORVU5Hr1G031520.2 Barley cytosol 33.33 34.64
KXG36979 Sorghum plastid 43.99 34.22
PGSC0003DMT400022011 Potato cytosol, peroxisome, plastid 14.09 33.33
Os02t0640600-00 Rice mitochondrion 39.86 31.18
GSMUA_Achr5P12210_001 Banana mitochondrion 49.48 23.45
Os04t0531750-00 Rice mitochondrion 3.78 3.32
Protein Annotations
EnsemblPlants:PGSC0003DMT400000067EnsemblPlantsGene:PGSC0003DMG402000020Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famInterPro:Sc_DH/Rdtase_CS
PANTHER:PTHR43490PANTHER:PTHR43490:SF43PFAM:PF00106PGSC:PGSC0003DMG402000020PRINTS:PR00080PRINTS:PR00081
ScanProsite:PS00061SUPFAM:SSF51735UniParc:UPI000295921AUniProt:M0ZG24MapMan:50.1.1:
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402000020]
Coordinates
chr1:+:71818482..71821156
Molecular Weight (calculated)
32417.4 Da
IEP (calculated)
6.749
GRAVY (calculated)
0.022
Length
291 amino acids
Sequence
(BLAST)
001: VIRIAVVSGG NKGIGLEICR QLASKGILVI LTARDEKKGN EAVINMLKMD GHSNYNIIFH QLDVTDIFSI VRLKDFIKDR FGKLDILVNN AAILGVLLDK
101: DFIISPQQDL FIEKMKVATQ TIDIAEECIK TNYYGAKWMI QELLPLLQLS DSPRIVNVSS STGKLQHVRN EWAIGVLNNC DNLTEDKVDE VLNVFLKDFK
201: EDLLESKNWP LTISAYVASK AALNGYTRIL AKKYPNFLIN CVCPGYVKTD LCCNSGTLTV EEGAQSPVWL ALLPQGGPSG NFYNRKELSS F
Best Arabidopsis Sequence Match ( AT3G61220.1 )
(BLAST)
001: MAEETPRYAV VTGANRGIGF EICRQLASEG IRVVLTSRDE NRGLEAVETL KKELEISDQS LLFHQLDVAD PASITSLAEF VKTQFGKLDI LVNNAGIGGI
101: ITDAEALRAG AGKEGFKWDE IITETYELTE ECIKINYYGP KRMCEAFIPL LKLSDSPRIV NVSSSMGQLK NVLNEWAKGI LSDAENLTEE RIDQVINQLL
201: NDFKEGTVKE KNWAKFMSAY VVSKASLNGY TRVLAKKHPE FRVNAVCPGF VKTDMNFKTG VLSVEEGASS PVRLALLPHQ ETPSGCFFSR KQVSEF
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNT2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.